PacMAN decision support system

Potential detection of Obelia bidentata in Fiji

Description:

Potential detection of Obelia bidentata with confidence low on 2022-02-01 in material sample S19, marker 18S

Confidence:

low

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Obelia bidentata
Cnidaria > Hydrozoa > Leptothecata > Campanulariidae
WoRMS: 117385

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

Reads:

8088.0

Names:

1

Occurrences:

view occurrences

id	c1674296-8e11-4fca-87d3-e99670781485
scientificName	Obelia bidentata
AphiaID	117385
eventDate	2022-02-01
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S19
target_gene	18S
DNA_sequence	TTGTTGGTTTCAACCTCCGCAGTAATGATCAAGAGGGACAGTTGGGGGCATCCGTATTTCGCAGTCAGAGGTGAAATTCTTGGATTTGCGAAAGACGAACAATTGCGAAAGCACTTGCCAAGAGTGTTTTCATTAATCAAGAACGAAAGTTAGAGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Obelia bidentata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117385", "confidence": 0.81 }, { "method": "VSEARCH", "scientificName": "Obelia_bidentata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117385", "accession": "AY789755.1.1733_U", "identity": 0.981, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Obelia_bidentata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117385", "accession": "FJ550589.1.1733_U", "identity": 0.981, "query_cover": 0.9938 } ] }
organismQuantity	8088.0

id	db7fda55-7465-4f4d-9e88-3a2ec99d92e3
scientificName	Obelia bidentata
AphiaID	117385
eventDate	2022-02-01
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S20
target_gene	18S
DNA_sequence	TTGTTGGTTTCAACCTCCGCAGTAATGATCAAGAGGGACAGTTGGGGGCATCCGTATTTCGCAGTCAGAGGTGAAATTCTTGGATTTGCGAAAGACGAACAATTGCGAAAGCACTTGCCAAGAGTGTTTTCATTAATCAAGAACGAAAGTTAGAGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Obelia bidentata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117385", "confidence": 0.81 }, { "method": "VSEARCH", "scientificName": "Obelia_bidentata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117385", "accession": "AY789755.1.1733_U", "identity": 0.981, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Obelia_bidentata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117385", "accession": "FJ550589.1.1733_U", "identity": 0.981, "query_cover": 0.9938 } ] }
organismQuantity	5571.0

id	d862d314-a080-4293-aa5b-a94be6d66d81
scientificName	Obelia bidentata
AphiaID	117385
eventDate	2022-02-01
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	S17
target_gene	18S
DNA_sequence	TTGTTGGTTTCAACCTCCGCAGTAATGATCAAGAGGGACAGTTGGGGGCATCCGTATTTCGCAGTCAGAGGTGAAATTCTTGGATTTGCGAAAGACGAACAATTGCGAAAGCACTTGCCAAGAGTGTTTTCATTAATCAAGAACGAAAGTTAGAGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Obelia bidentata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117385", "confidence": 0.81 }, { "method": "VSEARCH", "scientificName": "Obelia_bidentata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117385", "accession": "AY789755.1.1733_U", "identity": 0.981, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Obelia_bidentata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117385", "accession": "FJ550589.1.1733_U", "identity": 0.981, "query_cover": 0.9938 } ] }
organismQuantity	5017.0

id	737234f5-f054-4189-b735-3ad3371fb5e9
scientificName	Obelia bidentata
AphiaID	117385
eventDate	2022-02-01
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	S13
target_gene	18S
DNA_sequence	TTGTTGGTTTCAACCTCCGCAGTAATGATCAAGAGGGACAGTTGGGGGCATCCGTATTTCGCAGTCAGAGGTGAAATTCTTGGATTTGCGAAAGACGAACAATTGCGAAAGCACTTGCCAAGAGTGTTTTCATTAATCAAGAACGAAAGTTAGAGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Obelia bidentata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117385", "confidence": 0.81 }, { "method": "VSEARCH", "scientificName": "Obelia_bidentata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117385", "accession": "AY789755.1.1733_U", "identity": 0.981, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Obelia_bidentata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117385", "accession": "FJ550589.1.1733_U", "identity": 0.981, "query_cover": 0.9938 } ] }
organismQuantity	14.0

id	61440a4e-b9dc-4548-b84c-027ea56807ef
scientificName	Obelia bidentata
AphiaID	117385
eventDate	2022-02-01
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S15
target_gene	18S
DNA_sequence	TTGTTGGTTTCAACCTCCGCAGTAATGATCAAGAGGGACAGTTGGGGGCATCCGTATTTCGCAGTCAGAGGTGAAATTCTTGGATTTGCGAAAGACGAACAATTGCGAAAGCACTTGCCAAGAGTGTTTTCATTAATCAAGAACGAAAGTTAGAGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Obelia bidentata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117385", "confidence": 0.81 }, { "method": "VSEARCH", "scientificName": "Obelia_bidentata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117385", "accession": "AY789755.1.1733_U", "identity": 0.981, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Obelia_bidentata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117385", "accession": "FJ550589.1.1733_U", "identity": 0.981, "query_cover": 0.9938 } ] }
organismQuantity	12.0

id	36bd576a-747e-485b-98e9-0c4f4c1134dd
scientificName	Obelia bidentata
AphiaID	117385
eventDate	2022-02-01
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S16
target_gene	18S
DNA_sequence	TTGTTGGTTTCAACCTCCGCAGTAATGATCAAGAGGGACAGTTGGGGGCATCCGTATTTCGCAGTCAGAGGTGAAATTCTTGGATTTGCGAAAGACGAACAATTGCGAAAGCACTTGCCAAGAGTGTTTTCATTAATCAAGAACGAAAGTTAGAGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Obelia bidentata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117385", "confidence": 0.81 }, { "method": "VSEARCH", "scientificName": "Obelia_bidentata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117385", "accession": "AY789755.1.1733_U", "identity": 0.981, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Obelia_bidentata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117385", "accession": "FJ550589.1.1733_U", "identity": 0.981, "query_cover": 0.9938 } ] }
organismQuantity	10.0

id	64144074-10bd-4250-8c49-cea56dbcf01a
scientificName	Obelia bidentata
AphiaID	117385
eventDate	2022-02-01
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	S10
target_gene	18S
DNA_sequence	TTGTTGGTTTCAACCTCCGCAGTAATGATCAAGAGGGACAGTTGGGGGCATCCGTATTTCGCAGTCAGAGGTGAAATTCTTGGATTTGCGAAAGACGAACAATTGCGAAAGCACTTGCCAAGAGTGTTTTCATTAATCAAGAACGAAAGTTAGAGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Obelia bidentata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117385", "confidence": 0.81 }, { "method": "VSEARCH", "scientificName": "Obelia_bidentata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117385", "accession": "AY789755.1.1733_U", "identity": 0.981, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Obelia_bidentata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117385", "accession": "FJ550589.1.1733_U", "identity": 0.981, "query_cover": 0.9938 } ] }
organismQuantity	8.0

id	c538732e-0ad0-4354-a204-b85cf52bf783
scientificName	Obelia bidentata
AphiaID	117385
eventDate	2022-02-01
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	S18
target_gene	18S
DNA_sequence	TTGTTGGTTTCAACCTCCGCAGTAATGATCAAGAGGGACAGTTGGGGGCATCCGTATTTCGCAGTCAGAGGTGAAATTCTTGGATTTGCGAAAGACGAACAATTGCGAAAGCACTTGCCAAGAGTGTTTTCATTAATCAAGAACGAAAGTTAGAGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Obelia bidentata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117385", "confidence": 0.81 }, { "method": "VSEARCH", "scientificName": "Obelia_bidentata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117385", "accession": "AY789755.1.1733_U", "identity": 0.981, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Obelia_bidentata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117385", "accession": "FJ550589.1.1733_U", "identity": 0.981, "query_cover": 0.9938 } ] }
organismQuantity	6.0

id	ec5af35e-a3fc-486c-a1f0-b0d8b9efdd05
scientificName	Obelia bidentata
AphiaID	117385
eventDate	2022-02-01
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S20
target_gene	18S
DNA_sequence	TTGTTGGTTTCAACCTCCGCAGTAATGATTAAGAGGGACAGTTGGGGGCATCCGTATTTCGTAGTCAGAGGTGAAATTCTTGGATTTACGAAAGACGAACAACTGCGAAAGCATTTGCCAAGAGTGTTTTCATTAATCAAGAACGAAAGTTAGAGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Obelia bidentata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117385", "confidence": 0.83 }, { "method": "VSEARCH", "scientificName": "Obelia_bidentata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117385", "accession": "AY789754.1.1730_U", "identity": 0.988, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Obelia_bidentata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117385", "accession": "AY789755.1.1733_U", "identity": 0.988, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Obelia_bidentata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117385", "accession": "FJ550589.1.1733_U", "identity": 0.988, "query_cover": 0.9938 } ] }
organismQuantity	6.0

id	d0bcc9df-8bde-4761-899a-b37ce5f9dab8
scientificName	Obelia bidentata
AphiaID	117385
eventDate	2022-02-01
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	S17
target_gene	18S
DNA_sequence	TTGTTGGTTTCAACCTCCGCAGTAATGATTAAGAGGGACAGTTGGGGGCATCCGTATTTCGTAGTCAGAGGTGAAATTCTTGGATTTACGAAAGACGAACAACTGCGAAAGCATTTGCCAAGAGTGTTTTCATTAATCAAGAACGAAAGTTAGAGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Obelia bidentata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117385", "confidence": 0.83 }, { "method": "VSEARCH", "scientificName": "Obelia_bidentata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117385", "accession": "AY789754.1.1730_U", "identity": 0.988, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Obelia_bidentata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117385", "accession": "AY789755.1.1733_U", "identity": 0.988, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Obelia_bidentata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117385", "accession": "FJ550589.1.1733_U", "identity": 0.988, "query_cover": 0.9938 } ] }
organismQuantity	4.0

id	dbca1a2d-9107-49e6-b27d-ffdb967495a2
scientificName	Obelia bidentata
AphiaID	117385
eventDate	2022-02-01
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S19
target_gene	18S
DNA_sequence	TTGTTGGTTTCAACCTCCGCAGTAATGATTAAGAGGGACAGTTGGGGGCATCCGTATTTCGTAGTCAGAGGTGAAATTCTTGGATTTACGAAAGACGAACAACTGCGAAAGCATTTGCCAAGAGTGTTTTCATTAATCAAGAACGAAAGTTAGAGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Obelia bidentata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117385", "confidence": 0.83 }, { "method": "VSEARCH", "scientificName": "Obelia_bidentata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117385", "accession": "AY789754.1.1730_U", "identity": 0.988, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Obelia_bidentata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117385", "accession": "AY789755.1.1733_U", "identity": 0.988, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Obelia_bidentata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117385", "accession": "FJ550589.1.1733_U", "identity": 0.988, "query_cover": 0.9938 } ] }
organismQuantity	2.0

id	d9a0997c-ec1a-4724-a724-437a00e6d077
scientificName	Obelia bidentata
AphiaID	117385
eventDate	2022-02-01
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	S11
target_gene	18S
DNA_sequence	TTGTTGGTTTCAACCTCCGCAGTAATGATCAAGAGGGACAGTTGGGGGCATCCGTATTTCGCAGTCAGAGGTGAAATTCTTGGATTTGCGAAAGACGAACAATTGCGAAAGCACTTGCCAAGAGTGTTTTCATTAATCAAGAACGAAAGTTAGAGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Obelia bidentata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117385", "confidence": 0.81 }, { "method": "VSEARCH", "scientificName": "Obelia_bidentata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117385", "accession": "AY789755.1.1733_U", "identity": 0.981, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Obelia_bidentata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117385", "accession": "FJ550589.1.1733_U", "identity": 0.981, "query_cover": 0.9938 } ] }
organismQuantity	1.0

id	db5cd214-6a11-455a-9070-ce772a567f22
scientificName	Obelia bidentata
AphiaID	117385
eventDate	2022-02-01
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S42
target_gene	18S
DNA_sequence	TTGTTGGTTTCAACCTCCGCAGTAATGATTAAGAGGGACAGTTGGGGGCATCCGTATTTCGTAGTCAGAGGTGAAATTCTTGGATTTACGAAAGACGAACAACTGCGAAAGCATTTGCCAAGAGTGTTTTCATTAATCAAGAACGAAAGTTAGAGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Obelia bidentata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117385", "confidence": 0.83 }, { "method": "VSEARCH", "scientificName": "Obelia_bidentata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117385", "accession": "AY789754.1.1730_U", "identity": 0.988, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Obelia_bidentata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117385", "accession": "AY789755.1.1733_U", "identity": 0.988, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Obelia_bidentata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117385", "accession": "FJ550589.1.1733_U", "identity": 0.988, "query_cover": 0.9938 } ] }
organismQuantity	1.0

Obelia bidentata in Fiji

Status

Obelia bidentata does not have an offial status in Fiji.

Notes

No notes found.