| Occurrences: |
view occurrences
| id |
381dfb1e-2e00-42d0-89db-55b8b74f81da
|
| scientificName |
Apionsoma (Apionsoma) misakianum
|
| AphiaID |
266492
|
| eventDate |
2023-08-15
|
| decimalLongitude |
178.425933
|
| decimalLatitude |
-18.1293
|
| materialSampleID |
USP-24-01-55
|
| target_gene |
18S
|
| DNA_sequence |
TGTTGGTTTTCGGAGCCCGAGGTAATGATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGGTGTTAGAGGTGAAATTCTTGGATCATCGCAAGACGAACAACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCAAGAACGAAAGTCAGAGGTTCG
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Apionsoma misakianum",
"confidence": 0.93
},
{
"method": "VSEARCH",
"scientificName": "Apionsoma_misakianum",
"accession": "AY210440.1.1815_U",
"identity": 1,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Apionsoma_misakianum",
"accession": "DQ299952.1.1769_U",
"identity": 1,
"query_cover": 0.9938
}
]
}
|
| organismQuantity |
1.0
|
| id |
7002eb3a-32b8-4bcf-a08c-886a6ac2a6b3
|
| scientificName |
Apionsoma (Apionsoma) misakianum
|
| AphiaID |
266492
|
| eventDate |
2023-08-15
|
| decimalLongitude |
178.425933
|
| decimalLatitude |
-18.1293
|
| materialSampleID |
USP-24-01-57
|
| target_gene |
18S
|
| DNA_sequence |
TGTTGGTTTTCGGAGCCCGAGGTAATGATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGGTGTTAGAGGTGAAATTCTTGGATCATCGCAAGACGAACAACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCAAGAACGAAAGTCAGAGGTTCG
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Apionsoma misakianum",
"confidence": 0.93
},
{
"method": "VSEARCH",
"scientificName": "Apionsoma_misakianum",
"accession": "AY210440.1.1815_U",
"identity": 1,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Apionsoma_misakianum",
"accession": "DQ299952.1.1769_U",
"identity": 1,
"query_cover": 0.9938
}
]
}
|
| organismQuantity |
1.0
|
|