PacMAN decision support system

Potential detection of Callopora lineata in Fiji

Description:

Potential detection of Callopora lineata with confidence low on 2023-04-27 in material sample USP-24-01-08, marker 18S

Confidence:

low

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Callopora lineata
Bryozoa > Gymnolaemata > Cheilostomatida > Calloporidae
WoRMS: 111197

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

1.0

Reads:

124.0

Names:

5

Occurrences:

view occurrences

id	76241231-43f0-4f2d-8c36-2a1137cf2acc
scientificName	Callopora lineata
AphiaID	111197
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-08
target_gene	18S
DNA_sequence	GTTGGTTAGAGAGTCGGCGAGCCAATGATTAACAGGGACTGCCGGGGGCATTAGTACTCGGACGGGAGAGGTGAAATTCAAGGATCGTCCGAAGACTCCCTACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCAAGAACGAAAGTCAGAGGTGCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Callopora lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "confidence": 0.95 }, { "method": "VSEARCH", "scientificName": "Bugula_turrita", "scientificNameID": "urn:lsid:marinespecies.org:taxname:159783", "accession": "AY210443.1.1841_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Callopora_dumerilii", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111196", "accession": "FJ152025.1.2143_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Bugula_plumosa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111159", "accession": "JN680951.1.1836_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Callopora_lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "accession": "JN680949.1.1836_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Bugula_fulva", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111153", "accession": "FJ152023.1.2123_U", "identity": 0.994, "query_cover": 0.9938 } ] }
organismQuantity	124.0

id	3c67e707-b571-4d73-beaa-e237dc3d78a2
scientificName	Callopora lineata
AphiaID	111197
eventDate	2023-04-27
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-03
target_gene	18S
DNA_sequence	GTTGGTTAGAGAGTCGGCGAGCCAATGATTAACAGGGACTGCCGGGGGCATTAGTACTCGGACGGGAGAGGTGAAATTCAAGGATCGTCCGAAGACTCCCTACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCAAGAACGAAAGTCAGAGGTGCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Callopora lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "confidence": 0.95 }, { "method": "VSEARCH", "scientificName": "Bugula_turrita", "scientificNameID": "urn:lsid:marinespecies.org:taxname:159783", "accession": "AY210443.1.1841_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Callopora_dumerilii", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111196", "accession": "FJ152025.1.2143_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Bugula_plumosa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111159", "accession": "JN680951.1.1836_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Callopora_lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "accession": "JN680949.1.1836_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Bugula_fulva", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111153", "accession": "FJ152023.1.2123_U", "identity": 0.994, "query_cover": 0.9938 } ] }
organismQuantity	43.0

id	eea92321-e73a-406a-b813-33d46a70769d
scientificName	Callopora lineata
AphiaID	111197
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-10
target_gene	18S
DNA_sequence	GTTGGTTAGAGAGTCGGCGAGCCAATGATTAACAGGGACTGCCGGGGGCATTAGTACTCGGACGGGAGAGGTGAAATTCAAGGATCGTCCGAAGACTCCCTACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCAAGAACGAAAGTCAGAGGTGCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Callopora lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "confidence": 0.95 }, { "method": "VSEARCH", "scientificName": "Bugula_turrita", "scientificNameID": "urn:lsid:marinespecies.org:taxname:159783", "accession": "AY210443.1.1841_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Callopora_dumerilii", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111196", "accession": "FJ152025.1.2143_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Bugula_plumosa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111159", "accession": "JN680951.1.1836_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Callopora_lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "accession": "JN680949.1.1836_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Bugula_fulva", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111153", "accession": "FJ152023.1.2123_U", "identity": 0.994, "query_cover": 0.9938 } ] }
organismQuantity	39.0

id	407e5fb2-a99f-41e2-b2cd-8c6f82e16ccb
scientificName	Callopora lineata
AphiaID	111197
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-12
target_gene	18S
DNA_sequence	GTTGGTTAGAGAGTCGGCGAGCCAATGATTAACAGGGACTGCCGGGGGCATTAGTACTCGGACGGGAGAGGTGAAATTCAAGGATCGTCCGAAGACTCCCTACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCAAGAACGAAAGTCAGAGGTGCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Callopora lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "confidence": 0.95 }, { "method": "VSEARCH", "scientificName": "Bugula_turrita", "scientificNameID": "urn:lsid:marinespecies.org:taxname:159783", "accession": "AY210443.1.1841_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Callopora_dumerilii", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111196", "accession": "FJ152025.1.2143_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Bugula_plumosa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111159", "accession": "JN680951.1.1836_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Callopora_lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "accession": "JN680949.1.1836_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Bugula_fulva", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111153", "accession": "FJ152023.1.2123_U", "identity": 0.994, "query_cover": 0.9938 } ] }
organismQuantity	2.0

id	62437b61-2c5b-403a-9f54-49ef20a4c521
scientificName	Callopora lineata
AphiaID	111197
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-13
target_gene	18S
DNA_sequence	GTTGGTTAGAGAGTCGGCGAGCCAATGATTAACAGGGACTGCCGGGGGCATTAGTACTCGGACGGGAGAGGTGAAATTCAAGGATCGTCCGAAGACTCCCTACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCAAGAACGAAAGTCAGAGGTGCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Callopora lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "confidence": 0.95 }, { "method": "VSEARCH", "scientificName": "Bugula_turrita", "scientificNameID": "urn:lsid:marinespecies.org:taxname:159783", "accession": "AY210443.1.1841_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Callopora_dumerilii", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111196", "accession": "FJ152025.1.2143_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Bugula_plumosa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111159", "accession": "JN680951.1.1836_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Callopora_lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "accession": "JN680949.1.1836_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Bugula_fulva", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111153", "accession": "FJ152023.1.2123_U", "identity": 0.994, "query_cover": 0.9938 } ] }
organismQuantity	2.0

id	419fda61-c6d1-4a82-9521-62f74c2c90ec
scientificName	Callopora lineata
AphiaID	111197
eventDate	2023-04-27
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-06
target_gene	18S
DNA_sequence	GTTGGTTAGAGAGTCGGCGAGCCAATGATTAACAGGGACTGCCGGGGGCATTAGTACTCGGACGGGAGAGGTGAAATTCAAGGATCGTCCGAAGACTCCCTACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCAAGAACGAAAGTCAGAGGTGCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Callopora lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "confidence": 0.95 }, { "method": "VSEARCH", "scientificName": "Bugula_turrita", "scientificNameID": "urn:lsid:marinespecies.org:taxname:159783", "accession": "AY210443.1.1841_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Callopora_dumerilii", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111196", "accession": "FJ152025.1.2143_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Bugula_plumosa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111159", "accession": "JN680951.1.1836_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Callopora_lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "accession": "JN680949.1.1836_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Bugula_fulva", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111153", "accession": "FJ152023.1.2123_U", "identity": 0.994, "query_cover": 0.9938 } ] }
organismQuantity	1.0

id	60f42d3a-2c84-47b1-9b0a-ad78d6167461
scientificName	Callopora lineata
AphiaID	111197
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-08
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAGCAGCGTATATTTATATTGCTGCGTTTAAAAAGCTCGTAGTTGAAGCGTCAGACGCGGGAGGGCGGACGGCCGCACTGGTCGCTCTCGCCCGACCGAGCCAGGCGCAGAGGGCGCGCGTCGCTTGCACTTTGCCGTGTGAGCGCGCCGCCGCTGCACGTTCACCTTGAAGAAATTGAACCGCTTAGAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Callopora lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "confidence": 0.84 }, { "method": "VSEARCH", "scientificName": "Cryptosula_pallasiana", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111343", "accession": "FJ196129.1.1578_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Cryptosula_pallasiana", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111343", "accession": "JN680940.1.1832_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bugula_turrita", "scientificNameID": "urn:lsid:marinespecies.org:taxname:159783", "accession": "AY210443.1.1841_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bugula_fulva", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111153", "accession": "FJ152023.1.2123_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Callopora_dumerilii", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111196", "accession": "FJ152025.1.2143_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	24.0

id	93fd2641-b6e4-4d76-9de0-461798c86d12
scientificName	Callopora lineata
AphiaID	111197
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-12
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAGCAGCGTATATTTATATTGCTGCGTTTAAAAAGCTCGTAGTTGAAGCGTCAGACGCGGGAGGGCGGACGGCCGCACTGGTCGCTCTCGCCCGACCGAGCCAGGCGCAGAGGGCGCGCGTCGCTTGCACTTTGCCGTGTGAGCGCGCCGCCGCTGCACGTTCACCTTGAAGAAATTGAACCGCTTAGAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Callopora lineata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111197", "confidence": 0.84 }, { "method": "VSEARCH", "scientificName": "Cryptosula_pallasiana", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111343", "accession": "FJ196129.1.1578_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Cryptosula_pallasiana", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111343", "accession": "JN680940.1.1832_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bugula_turrita", "scientificNameID": "urn:lsid:marinespecies.org:taxname:159783", "accession": "AY210443.1.1841_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Bugula_fulva", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111153", "accession": "FJ152023.1.2123_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Callopora_dumerilii", "scientificNameID": "urn:lsid:marinespecies.org:taxname:111196", "accession": "FJ152025.1.2143_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	1.0

Callopora lineata in Fiji

Status

Callopora lineata does not have an offial status in Fiji.

Notes

No notes found.