| Occurrences: |
view occurrences
| id |
ea624687-c921-451b-b159-41cb9fd7eaf1
|
| scientificName |
Aetea anguina
|
| AphiaID |
111062
|
| eventDate |
2023-04-27
|
| decimalLongitude |
178.4255
|
| decimalLatitude |
-18.13163
|
| materialSampleID |
USP-24-01-03
|
| target_gene |
18S
|
| DNA_sequence |
GTTGGTTTTAGAGTCGGCGAGCCAATGATTAACAGGGACTGCCGGGGGCATTCGTACTCGCGCGGGAGAGGTGAAATTCAAGGATCGTGCGAAGACGTCCCACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCAAGAACGAAAGTCAGAGGTGCG
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Aetea anguina",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111062",
"confidence": 0.88
},
{
"method": "VSEARCH",
"scientificName": "Aetea_anguina",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111062",
"accession": "JN680942.1.1846_U",
"identity": 0.994,
"query_cover": 0.9938
}
]
}
|
| organismQuantity |
16.0
|
| id |
4329f6ac-d563-4204-a829-2f7eba44f73f
|
| scientificName |
Aetea anguina
|
| AphiaID |
111062
|
| eventDate |
2023-04-27
|
| decimalLongitude |
178.42325
|
| decimalLatitude |
-18.13513
|
| materialSampleID |
USP-24-01-18
|
| target_gene |
18S
|
| DNA_sequence |
GTTGGTTTTAGAGTCGGCGAGCCAATGATTAACAGGGACTGCCGGGGGCATTCGTACTCGCGCGGGAGAGGTGAAATTCAAGGATCGTGCGAAGACGTCCCACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCAAGAACGAAAGTCAGAGGTGCG
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Aetea anguina",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111062",
"confidence": 0.88
},
{
"method": "VSEARCH",
"scientificName": "Aetea_anguina",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111062",
"accession": "JN680942.1.1846_U",
"identity": 0.994,
"query_cover": 0.9938
}
]
}
|
| organismQuantity |
13.0
|
| id |
fe33a9ab-b124-4500-8c2d-f71b556742cd
|
| scientificName |
Aetea anguina
|
| AphiaID |
111062
|
| eventDate |
2023-04-27
|
| decimalLongitude |
178.4255
|
| decimalLatitude |
-18.13163
|
| materialSampleID |
USP-24-01-03
|
| target_gene |
18S
|
| DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAGCAGCGTATATTTATATTGCTGCGTTTAAAAAGCTCGTAGTTGAAACGTCAGACGCGGGAGGACGGACGGCCGCACTGGTCGCTTCTCGTCCGACCGAGCCAGGCGCGGAGGGCGTCCGCCGGTTGCACTTCGCCGTGTGACCGCGGCGCCGCTGCACGTTCACCTTGAAGAAATTGAACCGCTTAGA
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Aetea anguina",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111062",
"confidence": 0.86
},
{
"method": "VSEARCH",
"scientificName": "Aetea_anguina",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111062",
"accession": "JN680942.1.1846_U",
"identity": 0.986,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Electra_pilosa",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111355",
"accession": "FJ196119.1.1564_U",
"identity": 0.971,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Bryozoa_XXX_sp.",
"accession": "FJ153776.1.1814_U",
"identity": 0.971,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Bryozoa_XXX_sp.",
"accession": "FJ153763.1.1819_U",
"identity": 0.971,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Electra_pilosa",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111355",
"accession": "AM886846.1.1441_U",
"identity": 0.971,
"query_cover": 0.9952
}
]
}
|
| organismQuantity |
16.0
|
| id |
7b125840-662f-4c23-aad8-1d66ae379bf7
|
| scientificName |
Aetea anguina
|
| AphiaID |
111062
|
| eventDate |
2023-04-27
|
| decimalLongitude |
178.42325
|
| decimalLatitude |
-18.13513
|
| materialSampleID |
USP-24-01-18
|
| target_gene |
18S
|
| DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAGCAGCGTATATTTATATTGCTGCGTTTAAAAAGCTCGTAGTTGAAACGTCAGACGCGGGAGGACGGACGGCCGCACTGGTCGCTTCTCGTCCGACCGAGCCAGGCGCGGAGGGCGTCCGCCGGTTGCACTTCGCCGTGTGACCGCGGCGCCGCTGCACGTTCACCTTGAAGAAATTGAACCGCTTAGA
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Aetea anguina",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111062",
"confidence": 0.86
},
{
"method": "VSEARCH",
"scientificName": "Aetea_anguina",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111062",
"accession": "JN680942.1.1846_U",
"identity": 0.986,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Electra_pilosa",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111355",
"accession": "FJ196119.1.1564_U",
"identity": 0.971,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Bryozoa_XXX_sp.",
"accession": "FJ153776.1.1814_U",
"identity": 0.971,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Bryozoa_XXX_sp.",
"accession": "FJ153763.1.1819_U",
"identity": 0.971,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Electra_pilosa",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111355",
"accession": "AM886846.1.1441_U",
"identity": 0.971,
"query_cover": 0.9952
}
]
}
|
| organismQuantity |
13.0
|
|