PacMAN decision support system

Potential detection of Hydroides minax in Fiji

Description:

Potential detection of Hydroides minax with confidence low on 2023-08-24 in material sample USP-24-01-34, marker 18S

Confidence:

low

Risk:

medium view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Hydroides minax
Annelida > Polychaeta > Sabellida > Serpulidae
WoRMS: 131007

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

1.0

Reads:

7.0

Names:

4

Occurrences:

view occurrences

id	d7fd0825-254e-462d-ab7a-03e9a990f6e5
scientificName	Serpula vermicularis
AphiaID	131051
eventDate	2023-08-24
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-34
target_gene	18S
DNA_sequence	CCGTTGGTCTCTGTGACTGGTGTAATGATTAAGAGGGACTGCCGGGGGCATTGGTATGGCGGGGTTAGAGGTGAAATTCTTGGATCCTCGCCAGACCAACAAAAGCGAAAGCATTTGCCAAGAATGTCTTCATTAATCAAGAACGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Serpula vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Serpula_columbiana", "scientificNameID": "urn:lsid:marinespecies.org:taxname:338088", "accession": "DQ317127.1.1715_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydroides_minax", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131007", "accession": "EU184063.1.1735_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Serpula_vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "accession": "AY395721.1.1715_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydroides_tuberculatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:328479", "accession": "EU184059.1.1740_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Serpula_vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "accession": "DQ140409.1.1708_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	7.0

id	d6fc32af-d18a-4cb8-ab79-999f67b1c323
scientificName	Serpula vermicularis
AphiaID	131051
eventDate	2023-08-24
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-33
target_gene	18S
DNA_sequence	CCGTTGGTCTCTGTGACTGGTGTAATGATTAAGAGGGACTGCCGGGGGCATTGGTATGGCGGGGTTAGAGGTGAAATTCTTGGATCCTCGCCAGACCAACAAAAGCGAAAGCATTTGCCAAGAATGTCTTCATTAATCAAGAACGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Serpula vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Serpula_columbiana", "scientificNameID": "urn:lsid:marinespecies.org:taxname:338088", "accession": "DQ317127.1.1715_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydroides_minax", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131007", "accession": "EU184063.1.1735_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Serpula_vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "accession": "AY395721.1.1715_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydroides_tuberculatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:328479", "accession": "EU184059.1.1740_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Serpula_vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "accession": "DQ140409.1.1708_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	6.0

id	84a12a6f-dae0-43c6-b2cc-39a997e2308d
scientificName	Serpula vermicularis
AphiaID	131051
eventDate	2023-08-24
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-64
target_gene	18S
DNA_sequence	CCGTTGGTCTCTGTGACTGGTGTAATGATTAAGAGGGACTGCCGGGGGCATTGGTATGGCGGGGTTAGAGGTGAAATTCTTGGATCCTCGCCAGACCAACAAAAGCGAAAGCATTTGCCAAGAATGTCTTCATTAATCAAGAACGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Serpula vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Serpula_columbiana", "scientificNameID": "urn:lsid:marinespecies.org:taxname:338088", "accession": "DQ317127.1.1715_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydroides_minax", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131007", "accession": "EU184063.1.1735_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Serpula_vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "accession": "AY395721.1.1715_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydroides_tuberculatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:328479", "accession": "EU184059.1.1740_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Serpula_vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "accession": "DQ140409.1.1708_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	2.0

id	d11c0b95-848b-4bc3-b0a5-249ddc798837
scientificName	Serpula vermicularis
AphiaID	131051
eventDate	2023-08-24
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-31
target_gene	18S
DNA_sequence	CCGTTGGTCTCTGTGACTGGTGTAATGATTAAGAGGGACTGCCGGGGGCATTGGTATGGCGGGGTTAGAGGTGAAATTCTTGGATCCTCGCCAGACCAACAAAAGCGAAAGCATTTGCCAAGAATGTCTTCATTAATCAAGAACGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Serpula vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Serpula_columbiana", "scientificNameID": "urn:lsid:marinespecies.org:taxname:338088", "accession": "DQ317127.1.1715_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydroides_minax", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131007", "accession": "EU184063.1.1735_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Serpula_vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "accession": "AY395721.1.1715_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydroides_tuberculatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:328479", "accession": "EU184059.1.1740_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Serpula_vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "accession": "DQ140409.1.1708_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	2.0

id	ec29a251-0dd2-4564-bc0b-8a185f525906
scientificName	Serpula vermicularis
AphiaID	131051
eventDate	2023-08-24
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-30
target_gene	18S
DNA_sequence	CCGTTGGTCTCTGTGACTGGTGTAATGATTAAGAGGGACTGCCGGGGGCATTGGTATGGCGGGGTTAGAGGTGAAATTCTTGGATCCTCGCCAGACCAACAAAAGCGAAAGCATTTGCCAAGAATGTCTTCATTAATCAAGAACGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Serpula vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Serpula_columbiana", "scientificNameID": "urn:lsid:marinespecies.org:taxname:338088", "accession": "DQ317127.1.1715_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydroides_minax", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131007", "accession": "EU184063.1.1735_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Serpula_vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "accession": "AY395721.1.1715_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydroides_tuberculatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:328479", "accession": "EU184059.1.1740_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Serpula_vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "accession": "DQ140409.1.1708_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	2.0

id	f00f186e-ffcc-4b50-92d0-111169256625
scientificName	Serpula vermicularis
AphiaID	131051
eventDate	2023-08-24
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-32
target_gene	18S
DNA_sequence	CCGTTGGTCTCTGTGACTGGTGTAATGATTAAGAGGGACTGCCGGGGGCATTGGTATGGCGGGGTTAGAGGTGAAATTCTTGGATCCTCGCCAGACCAACAAAAGCGAAAGCATTTGCCAAGAATGTCTTCATTAATCAAGAACGAAAGTCAGAGGTTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Serpula vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Serpula_columbiana", "scientificNameID": "urn:lsid:marinespecies.org:taxname:338088", "accession": "DQ317127.1.1715_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydroides_minax", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131007", "accession": "EU184063.1.1735_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Serpula_vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "accession": "AY395721.1.1715_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydroides_tuberculatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:328479", "accession": "EU184059.1.1740_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Serpula_vermicularis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131051", "accession": "DQ140409.1.1708_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	2.0

id	a722fe5f-7193-4af9-bc8e-88dc3448e175
scientificName	Hydroides
eventDate	2023-08-24
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-34
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGATCTCGGGTATCGTCTCGGTGGTCCTGTTCACGCAGGCACTGCCTTGATGACCTAACCGATGGTTGAACGACTCCGAGTGCCCTTCACTGGGTGCTCGTGGGTGGCCATCGCGTTTACTGTGAAAAAATTAGAGTGTTCAAAGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Hydroides", "scientificNameID": "urn:lsid:marinespecies.org:taxname:129566", "confidence": 0.83 }, { "method": "VSEARCH", "scientificName": "Hydroides_ezoensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131003", "accession": "EU184062.1.1745_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Hydroides_minax", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131007", "accession": "EU184063.1.1735_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Hydroides_tuberculatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:328479", "accession": "EU184059.1.1740_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Hydroides_trivesiculosus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:328477", "accession": "EU184060.1.1723_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Hydroides_sanctaecrucis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:333645", "accession": "EU184061.1.1774_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	6.0

id	b25e2fd2-839b-44a1-8d7b-4d0c272fcb90
scientificName	Hydroides
eventDate	2023-08-24
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-33
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGATCTCGGGTATCGTCTCGGTGGTCCTGTTCACGCAGGCACTGCCTTGATGACCTAACCGATGGTTGAACGACTCCGAGTGCCCTTCACTGGGTGCTCGTGGGTGGCCATCGCGTTTACTGTGAAAAAATTAGAGTGTTCAAAGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Hydroides", "scientificNameID": "urn:lsid:marinespecies.org:taxname:129566", "confidence": 0.83 }, { "method": "VSEARCH", "scientificName": "Hydroides_ezoensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131003", "accession": "EU184062.1.1745_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Hydroides_minax", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131007", "accession": "EU184063.1.1735_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Hydroides_tuberculatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:328479", "accession": "EU184059.1.1740_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Hydroides_trivesiculosus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:328477", "accession": "EU184060.1.1723_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Hydroides_sanctaecrucis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:333645", "accession": "EU184061.1.1774_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	3.0

id	44137958-ddc3-48f1-a9a2-bd0d08a0d81e
scientificName	Hydroides
eventDate	2023-08-24
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-31
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGATCTCGGGTATCGTCTCGGTGGTCCTGTTCACGCAGGCACTGCCTTGATGACCTAACCGATGGTTGAACGACTCCGAGTGCCCTTCACTGGGTGCTCGTGGGTGGCCATCGCGTTTACTGTGAAAAAATTAGAGTGTTCAAAGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Hydroides", "scientificNameID": "urn:lsid:marinespecies.org:taxname:129566", "confidence": 0.83 }, { "method": "VSEARCH", "scientificName": "Hydroides_ezoensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131003", "accession": "EU184062.1.1745_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Hydroides_minax", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131007", "accession": "EU184063.1.1735_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Hydroides_tuberculatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:328479", "accession": "EU184059.1.1740_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Hydroides_trivesiculosus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:328477", "accession": "EU184060.1.1723_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Hydroides_sanctaecrucis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:333645", "accession": "EU184061.1.1774_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	2.0

id	635cb837-7781-4231-a7cb-7029177209c6
scientificName	Hydroides
eventDate	2023-08-24
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-32
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGATCTCGGGTATCGTCTCGGTGGTCCTGTTCACGCAGGCACTGCCTTGATGACCTAACCGATGGTTGAACGACTCCGAGTGCCCTTCACTGGGTGCTCGTGGGTGGCCATCGCGTTTACTGTGAAAAAATTAGAGTGTTCAAAGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Hydroides", "scientificNameID": "urn:lsid:marinespecies.org:taxname:129566", "confidence": 0.83 }, { "method": "VSEARCH", "scientificName": "Hydroides_ezoensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131003", "accession": "EU184062.1.1745_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Hydroides_minax", "scientificNameID": "urn:lsid:marinespecies.org:taxname:131007", "accession": "EU184063.1.1735_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Hydroides_tuberculatus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:328479", "accession": "EU184059.1.1740_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Hydroides_trivesiculosus", "scientificNameID": "urn:lsid:marinespecies.org:taxname:328477", "accession": "EU184060.1.1723_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Hydroides_sanctaecrucis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:333645", "accession": "EU184061.1.1774_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	2.0

Hydroides minax in Fiji

Status

Hydroides minax does not have an offial status in Fiji.

Notes

No notes found.