PacMAN decision support system

Potential detection of Ascidia gemmata in Fiji

Description:

Potential detection of Ascidia gemmata with confidence low on 2022-11-23 in material sample S178, marker COI

Confidence:

low

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Ascidia gemmata
Chordata > Ascidiacea > Phlebobranchia > Ascidiidae
WoRMS: 249992

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

Reads:

705.0

Names:

Occurrences:

view occurrences

id	4bb8203d-1bc1-4ac6-a954-8eb86cda1293
scientificName	Ascidia gemmata
AphiaID	249992
eventDate	2022-11-23
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S178
target_gene	COI
DNA_sequence	TCTCTCGAGCAATATTGCTCACTCTGGGCCTGCTGTGGATTTGGCTATTTTTTCATTGCACTTGGCTAGGGTTTCCAGTATCTTAGGCTCTATTAATTTTTTAGTGACTATAATAGGAATAAAATTAAGTGGGTTTAGTTTTCTAAATTTAAGCTTGTTTTGCTGGTCGGTTGTTTTTACAACTATTCTATTAGTATTGTCTTTACCTGTGCTAGCTGCTGCCATTACTATGTTGTTATTTGATCGAAACTTTAATACGAGTTTCTTTGATCCTGGAAGAGGAGGAGATCCTGTTCTTTATCAGCATTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ascidia gemmata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:249992", "confidence": 1 } ] }
organismQuantity	705.0

id	4c7f354b-3adb-470b-936c-44d38ebc09d1
scientificName	Ascidia gemmata
AphiaID	249992
eventDate	2022-11-23
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S166
target_gene	COI
DNA_sequence	TCTCTCGAGCAATATTGCTCACTCTGGGCCTGCTGTGGATTTGGCTATTTTTTCATTGCACTTGGCTAGGGTTTCCAGTATCTTAGGCTCTATTAATTTTTTAGTGACTATAATAGGAATAAAATTAAGTGGGTTTAGTTTTCTAAATTTAAGCTTGTTTTGCTGGTCGGTTGTTTTTACAACTATTCTATTAGTATTGTCTTTACCTGTGCTAGCTGCTGCCATTACTATGTTGTTATTTGATCGAAACTTTAATACGAGTTTCTTTGATCCTGGAAGAGGAGGAGATCCTGTTCTTTATCAGCATTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ascidia gemmata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:249992", "confidence": 1 } ] }
organismQuantity	25.0

id	aec4fcd3-d095-4797-9ec2-16ad378efc63
scientificName	Ascidia gemmata
AphiaID	249992
eventDate	2022-11-23
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S178
target_gene	COI
DNA_sequence	TCTCTCGAGCAATATTGCTCACTCTGGGCCTGCTGTGGATTTGGCTATTTTTTCATTGCACTTGGCTAGGGTTTCCAGTATCTTAGGCTCTATTAATTTTTTAGTGACTATAATAGGAATAAAATTAAGTGGGTTTAGTTTTCTAAATTTAAGCTTGTTTTGCTGGTCGGTTGTTTTTACAACTATTCTATTAGTATTGTCTTTACCCGTGCTAGCTGCTGCCATTACTATGTTGTTATTTGATCGAAACTTTAATACGAGTTTCTTTGATCCTGGAAGAGGAGGAGATCCTGTTCTTTATCAGCATTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ascidia gemmata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:249992", "confidence": 1 } ] }
organismQuantity	8.0

id	c71941b6-f8d5-451d-aff3-217e4c7f1be9
scientificName	Ascidia gemmata
AphiaID	249992
eventDate	2022-11-23
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S174
target_gene	COI
DNA_sequence	TCTCTCGAGCAATATTGCTCACTCTGGGCCTGCTGTGGATTTGGCTATTTTTTCATTGCACTTGGCTAGGGTTTCCAGTATCTTAGGCTCTATTAATTTTTTAGTGACTATAATAGGAATAAAATTAAGTGGGTTTAGTTTTCTAAATTTAAGCTTGTTTTGCTGGTCGGTTGTTTTTACAACTATTCTATTAGTATTGTCTTTACCTGTGCTAGCTGCTGCCATTACTATGTTGTTATTTGATCGAAACTTTAATACGAGTTTCTTTGATCCTGGAAGAGGAGGAGATCCTGTTCTTTATCAGCATTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ascidia gemmata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:249992", "confidence": 1 } ] }
organismQuantity	5.0

id	c1fdd5e9-92cd-4183-9280-c91aac35e43c
scientificName	Ascidia gemmata
AphiaID	249992
eventDate	2022-11-23
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S160
target_gene	COI
DNA_sequence	TCTCTCGAGCAATATTGCTCACTCTGGGCCTGCTGTGGATTTGGCTATTTTTTCATTGCACTTGGCTAGGGTTTCCAGTATCTTAGGCTCTATTAATTTTTTAGTGACTATAATAGGAATAAAATTAAGTGGGTTTAGTTTTCTAAATTTAAGCTTGTTTTGCTGGTCGGTTGTTTTTACAACTATTCTATTAGTATTGTCTTTACCTGTGCTAGCTGCTGCCATTACTATGTTGTTATTTGATCGAAACTTTAATACGAGTTTCTTTGATCCTGGAAGAGGAGGAGATCCTGTTCTTTATCAGCATTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ascidia gemmata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:249992", "confidence": 1 } ] }
organismQuantity	2.0

id	451dee69-f40f-47b6-8c43-1d0e929a91f5
scientificName	Ascidia gemmata
AphiaID	249992
eventDate	2022-11-23
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S163
target_gene	COI
DNA_sequence	TCTCTCGAGCAATATTGCTCACTCTGGGCCTGCTGTGGATTTGGCTATTTTTTCATTGCACTTGGCTAGGGTTTCCAGTATCTTAGGCTCTATTAATTTTTTAGTGACTATAATAGGAATAAAATTAAGTGGGTTTAGTTTTCTAAATTTAAGCTTGTTTTGCTGGTCGGTTGTTTTTACAACTATTCTATTAGTATTGTCTTTACCTGTGCTAGCTGCTGCCATTACTATGTTGTTATTTGATCGAAACTTTAATACGAGTTTCTTTGATCCTGGAAGAGGAGGAGATCCTGTTCTTTATCAGCATTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ascidia gemmata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:249992", "confidence": 1 } ] }
organismQuantity	1.0

id	608bb64e-b906-4416-8d63-0498530b8eb6
scientificName	Ascidia gemmata
AphiaID	249992
eventDate	2022-11-23
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S178
target_gene	COI
DNA_sequence	TCTCTCGAGCAATATTGCTCACTCTGGGCCTGCTGTGGATTTGGCTATTTTTTCATTGCACTTGGCTAGGGTTTCCAGTATCTTAGGCTCTATTAATTTTTTAGTGACTATAATAGGAATAAAATTAAGTGGATTTAGTTTTCTAAATTTAAGCTTGTTTTGCTGGTCGGTTGTTTTTACAACTATTCTATTAGTATTGTCTTTACCTGTGCTAGCTGCTGCCATTACTATGTTGTTATTTGATCGAAACTTTAATACGAGTTTCTTTGATCCTGGAAGAGGAGGAGATCCTGTTCTTTATCAGCATTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ascidia gemmata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:249992", "confidence": 1 } ] }
organismQuantity	1.0

id	e5fc13f1-8823-4803-8635-a8128ee237c6
scientificName	Ascidia gemmata
AphiaID	249992
eventDate	2022-11-23
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S161
target_gene	COI
DNA_sequence	TCTCTCGAGCAATATTGCTCACTCTGGGCCTGCTGTGGATTTGGCTATTTTTTCATTGCACTTGGCTAGGGTTTCCAGTATCTTAGGCTCTATTAATTTTTTAGTGACTATAATAGGAATAAAATTAAGTGGGTTTAGTTTTCTAAATTTAAGCTTGTTTTGCTGGTCGGTTGTTTTTACAACTATTCTATTAGTGTTGTCTTTACCCGTGCTAGCTGCTGCCATTACTATGTTGTTATTTGATCGAAACTTTAATACAAGTTTCTTTGATCCTGGAAGAGGAGGAGATCCTGTTCTTTATCAGCATTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": null }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ascidia gemmata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:249992", "confidence": 1 } ] }
organismQuantity	1.0

Ascidia gemmata does not have an offial status in Fiji.

No notes found.