identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Ciona savignyi",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:250292",
"confidence": 0.96
},
{
"method": "VSEARCH",
"scientificName": "Ciona_savignyi",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:250292",
"accession": "AACT01030526.2.1210_U",
"identity": 1,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Ciona_savignyi",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:250292",
"accession": "AACT01059881.1228.2676_U",
"identity": 1,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Ecteinascidia_herdmanni",
"accession": "FM244847.1.1607_U",
"identity": 1,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Ciona_savignyi",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:250292",
"accession": "AACT01041541.1.1348_U",
"identity": 1,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Ciona_savignyi",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:250292",
"accession": "AACT01045610.1.1202_U",
"identity": 1,
"query_cover": 0.9938
}
]
}
|