PacMAN decision support system

Potential detection of Ascidia gemmata in Fiji

Description:

Potential detection of Ascidia gemmata with confidence low on 2023-05-31 in material sample USP-24-01-122, marker COI

Confidence:

low

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Ascidia gemmata
Chordata > Ascidiacea > Phlebobranchia > Ascidiidae
WoRMS: 249992

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

Reads:

2.0

Names:

Occurrences:

view occurrences

id	4867d488-44f9-47ef-97ea-d1cb19daead9
scientificName	Ascidia gemmata
AphiaID	249992
eventDate	2023-05-31
decimalLongitude	178.4255
decimalLatitude	-18.13163
eventID	SUVA1_20230531_WA
materialSampleID	USP-24-01-122
target_gene	COI
DNA_sequence	TCTCTCGAGCAATATTGCTCACTCTGGGCCTGCTGTGGATTTGGCTATTTTTTCATTGCACCTGGCTAGGGTTTCCAGTATCTTAGGCTCTATTAATTTTTTAGTGACTATAATAGGAATAAAATTAAGTGGATTTAGTTTTCTAAATTTAAGCTTGTTTTGCTGGTCGGTTGTTTTTACAACTATTCTATTAGTATTGTCTTTACCCGTGCTAGCTGCTGCCATTACTATGTTGTTATTTGATCGAAACTTTAATACGAGTTTCTTTGATCCTGGAAGAGGAGGAGATCCTGTTCTTTATCAGCATTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ascidia gemmata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:249992", "confidence": 1 } ] }
organismQuantity	2.0

Ascidia gemmata does not have an offial status in Fiji.

No notes found.