PacMAN decision support system

Potential detection of Clava multicornis in Fiji

Description:

Potential detection of Clava multicornis with confidence medium on 2022-11-23 in material sample S71, marker 18S

Confidence:

medium

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Clava multicornis
Cnidaria > Hydrozoa > Anthoathecata > Hydractiniidae
WoRMS: 117426

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

1.0

Reads:

21136.0

Names:

Occurrences:

view occurrences

id	f5b8c640-076a-4fda-b063-d4fa4e73357a
scientificName	Apolemia
eventDate	2022-11-23
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S71
target_gene	18S
DNA_sequence	TTGTTGGTTTCTAGGACCGAAGTAATGATTAAGAGGGACAATTGGGGGCATCCGTATTTCGTTGTCAGAGGTGAAATTCTTGGATTTACGAAAGACGAACAACTGCGAAAGCACTTGCCAAGAGTGTTTTCATTAATCAAGAACGAAAGTTAGAGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Apolemia sp.", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Clava_multicornis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117426", "accession": "JQ407367.1.1618_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "HQ867466.1.870_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "KC583172.1.1095_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "JQ955782.1.960_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "HQ867240.1.879_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	21136.0

id	e140b63f-6afb-44d1-91aa-8e1999d71a05
scientificName	Apolemia
eventDate	2022-11-23
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S88
target_gene	18S
DNA_sequence	TTGTTGGTTTCTAGGACCGAAGTAATGATTAAGAGGGACAATTGGGGGCATCCGTATTTCGTTGTCAGAGGTGAAATTCTTGGATTTACGAAAGACGAACAACTGCGAAAGCACTTGCCAAGAGTGTTTTCATTAATCAAGAACGAAAGTTAGAGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Apolemia sp.", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Clava_multicornis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117426", "accession": "JQ407367.1.1618_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "HQ867466.1.870_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "KC583172.1.1095_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "JQ955782.1.960_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "HQ867240.1.879_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	1206.0

id	4e2dbb79-e3e8-4ce4-acd7-0630a0be0725
scientificName	Apolemia
eventDate	2022-11-23
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S76
target_gene	18S
DNA_sequence	TTGTTGGTTTCTAGGACCGAAGTAATGATTAAGAGGGACAATTGGGGGCATCCGTATTTCGTTGTCAGAGGTGAAATTCTTGGATTTACGAAAGACGAACAACTGCGAAAGCACTTGCCAAGAGTGTTTTCATTAATCAAGAACGAAAGTTAGAGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Apolemia sp.", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Clava_multicornis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117426", "accession": "JQ407367.1.1618_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "HQ867466.1.870_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "KC583172.1.1095_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "JQ955782.1.960_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "HQ867240.1.879_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	688.0

id	7de98b03-86ea-4a50-ae4d-2d31e0ec9d5c
scientificName	Apolemia
eventDate	2022-11-23
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S70
target_gene	18S
DNA_sequence	TTGTTGGTTTCTAGGACCGAAGTAATGATTAAGAGGGACAATTGGGGGCATCCGTATTTCGTTGTCAGAGGTGAAATTCTTGGATTTACGAAAGACGAACAACTGCGAAAGCACTTGCCAAGAGTGTTTTCATTAATCAAGAACGAAAGTTAGAGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Apolemia sp.", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Clava_multicornis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117426", "accession": "JQ407367.1.1618_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "HQ867466.1.870_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "KC583172.1.1095_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "JQ955782.1.960_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "HQ867240.1.879_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	360.0

id	617d01d4-6e61-4676-b340-6ec06072ac75
scientificName	Apolemia
eventDate	2022-11-23
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S73
target_gene	18S
DNA_sequence	TTGTTGGTTTCTAGGACCGAAGTAATGATTAAGAGGGACAATTGGGGGCATCCGTATTTCGTTGTCAGAGGTGAAATTCTTGGATTTACGAAAGACGAACAACTGCGAAAGCACTTGCCAAGAGTGTTTTCATTAATCAAGAACGAAAGTTAGAGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Apolemia sp.", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Clava_multicornis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117426", "accession": "JQ407367.1.1618_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "HQ867466.1.870_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "KC583172.1.1095_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "JQ955782.1.960_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "HQ867240.1.879_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	17.0

id	e9d1cda9-276c-4fcc-8f7b-b289c8bc51d3
scientificName	Apolemia
eventDate	2022-11-23
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S72
target_gene	18S
DNA_sequence	TTGTTGGTTTCTAGGACCGAAGTAATGATTAAGAGGGACAATTGGGGGCATCCGTATTTCGTTGTCAGAGGTGAAATTCTTGGATTTACGAAAGACGAACAACTGCGAAAGCACTTGCCAAGAGTGTTTTCATTAATCAAGAACGAAAGTTAGAGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Apolemia sp.", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Clava_multicornis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117426", "accession": "JQ407367.1.1618_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "HQ867466.1.870_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "KC583172.1.1095_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "JQ955782.1.960_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "HQ867240.1.879_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	8.0

id	98b5a6e7-e82e-412e-9370-a5aa6e85a91d
scientificName	Apolemia
eventDate	2022-11-23
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	S86
target_gene	18S
DNA_sequence	TTGTTGGTTTCTAGGACCGAAGTAATGATTAAGAGGGACAATTGGGGGCATCCGTATTTCGTTGTCAGAGGTGAAATTCTTGGATTTACGAAAGACGAACAACTGCGAAAGCACTTGCCAAGAGTGTTTTCATTAATCAAGAACGAAAGTTAGAGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Apolemia sp.", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Clava_multicornis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117426", "accession": "JQ407367.1.1618_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "HQ867466.1.870_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "KC583172.1.1095_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "JQ955782.1.960_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Hydrozoa_X_sp.", "accession": "HQ867240.1.879_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	1.0

Clava multicornis in Fiji

Status

Clava multicornis does not have an offial status in Fiji.

Notes

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