PacMAN decision support system

Potential detection of Saccostrea cuccullata in Fiji

Description:

Potential detection of Saccostrea cuccullata with confidence low on 2023-04-27 in material sample USP-24-01-107, marker COI

Confidence:

low

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Saccostrea cuccullata
Mollusca > Bivalvia > Ostreida > Ostreidae
WoRMS: 181316

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

Reads:

17.0

Names:

Occurrences:

view occurrences

id	52728f71-97d9-4a26-a1fe-994e278b1416
scientificName	Saccostrea cuccullata
AphiaID	181316
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
eventID	SUVA2_20230427_S3C
materialSampleID	USP-24-01-107
target_gene	COI
DNA_sequence	ATTATCTACTTTTTCGTATCATGGGATGTGTATGGATCTGGCTATTTTGAGACTTCATTTAGCCGGTATTAGGTCAATTTTTAGTTCGATTAATTTTATAGTGACTATTAAAAATATGCGTTCTGTAGATGGCCACTTGTTAAGGCTATTTCCGTGATCAATTAAGGTAACTTCTTTTTTGCTGCTGACAACTTTGCCTGTATTAGCCGGAGGTCTTACTATGCTTTTAACAGACCGACACTTTAACACCTCATTTTTCGACCCTGTAGGTGGGGGGGATCCAATTTTATTCCAGCATTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Saccostrea cucullata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:224654", "confidence": 0.87 } ] }
organismQuantity	17.0

id	c3b4d091-1f4e-4a6b-8f94-4c7ad9a89e08
scientificName	Saccostrea cuccullata
AphiaID	181316
eventDate	2023-04-27
decimalLongitude	178.4255
decimalLatitude	-18.13163
eventID	SUVA1_20230427_S2B
materialSampleID	USP-24-01-98
target_gene	COI
DNA_sequence	ATTATCTACTTTTTCGTATCATGGGATGTGTATGGATCTGGCTATTTTGAGACTTCATTTAGCCGGTATTAGGTCAATTTTTAGTTCGATTAATTTTATAGTGACTATTAAAAATATGCGTTCTGTAGATGGCCACTTGTTAAGGCTATTTCCGTGATCAATTAAGGTAACTTCTTTTTTGCTGCTGACAACTTTGCCTGTATTAGCCGGAGGTCTTACTATGCTTTTAACAGACCGACACTTTAACACCTCATTTTTCGACCCTGTAGGTGGGGGGGATCCAATTTTATTCCAGCATTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Saccostrea cucullata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:224654", "confidence": 0.87 } ] }
organismQuantity	4.0

id	88474e93-e096-4383-b6db-1ac6c84ea026
scientificName	Saccostrea cuccullata
AphiaID	181316
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
eventID	SUVA2_20230427_S3A
materialSampleID	USP-24-01-105
target_gene	COI
DNA_sequence	ATTATCTACTTTTTCGTATCATGGGATGTGTATGGATCTGGCTATTTTGAGACTTCATTTAGCCGGTATTAGGTCAATTTTTAGTTCGATTAATTTTATAGTGACTATTAAAAATATGCGTTCTGTAGATGGCCACTTGTTAAGGCTATTTCCGTGATCAATTAAGGTAACTTCTTTTTTGCTGCTGACAACTTTGCCTGTATTAGCCGGAGGTCTTACTATGCTTTTAACAGACCGACACTTTAACACCTCATTTTTCGACCCTGTAGGTGGGGGGGATCCAATTTTATTCCAGCATTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Saccostrea cucullata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:224654", "confidence": 0.87 } ] }
organismQuantity	3.0

id	a7cd9acc-be6e-4569-ab1e-9a2d055d72b5
scientificName	Saccostrea cuccullata
AphiaID	181316
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
eventID	SUVA2_20230427_WC
materialSampleID	USP-24-01-109
target_gene	COI
DNA_sequence	ATTATCTACTTTTTCGTATCATGGGATGTGTATGGATCTGGCTATTTTGAGACTTCATTTAGCCGGTATTAGGTCAATTTTTAGTTCGATTAATTTTATAGTGACTATTAAAAATATGCGTTCTGTAGATGGCCACTTGTTAAGGCTATTTCCGTGATCAATTAAGGTAACTTCTTTTTTGCTGCTGACAACTTTGCCTGTATTAGCCGGAGGTCTTACTATGCTTTTAACAGACCGACACTTTAACACCTCATTTTTCGACCCTGTAGGTGGGGGGGATCCAATTTTATTCCAGCATTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Saccostrea cucullata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:224654", "confidence": 0.87 } ] }
organismQuantity	3.0

id	aab6f600-a3ac-4a66-b9be-eb6d5d2f3fd1
scientificName	Saccostrea cuccullata
AphiaID	181316
eventDate	2023-04-27
decimalLongitude	178.42325
decimalLatitude	-18.13513
eventID	SUVA2_20230427_S3B
materialSampleID	USP-24-01-106
target_gene	COI
DNA_sequence	ATTATCTACTTTTTCGTATCATGGGATGTGTATGGATCTGGCTATTTTGAGACTTCATTTAGCCGGTATTAGGTCAATTTTTAGTTCGATTAATTTTATAGTGACTATTAAAAATATGCGTTCTGTAGATGGCCACTTGTTAAGGCTATTTCCGTGATCAATTAAGGTAACTTCTTTTTTGCTGCTGACAACTTTGCCTGTATTAGCCGGAGGTCTTACTATGCTTTTAACAGACCGACACTTTAACACCTCATTTTTCGACCCTGTAGGTGGGGGGGATCCAATTTTATTCCAGCATTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Saccostrea cucullata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:224654", "confidence": 0.87 } ] }
organismQuantity	2.0

Saccostrea cuccullata does not have an offial status in Fiji.

No notes found.