PacMAN decision support system

Potential detection of Obelia geniculata in Fiji

Description:

Potential detection of Obelia geniculata with confidence medium on 2023-11-28 in material sample USP-24-01-76, marker 18S

Confidence:

medium

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Obelia geniculata
Cnidaria > Hydrozoa > Leptothecata > Campanulariidae
WoRMS: 117388

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

0.99

Reads:

703.0

Names:

1

Occurrences:

view occurrences

id	532f2bf0-fe1b-4a82-8deb-58e9f4efe621
scientificName	Obelia geniculata
AphiaID	117388
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-76
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTGGGACTGGAGTCGTCGGGTCGGCCGCGAGGTCTGTTACTCGGCGGCTCTGTCATTACAATTCCCAGAGGCCTGTCGTGTGCTTCGCTGTACGCGGCAAGGGATTTGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAA
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Obelia geniculata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117388", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Obelia_geniculata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117388", "accession": "AY789769.1.1693_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Obelia_geniculata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117388", "accession": "AY789771.1.1546_U", "identity": 0.986, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Obelia_geniculata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117388", "accession": "AY789772.1.1290_U", "identity": 0.986, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Obelia_geniculata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117388", "accession": "FJ550548.1.1693_U", "identity": 0.986, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Obelia_dichotoma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117386", "accession": "AY789767.1.1692_U", "identity": 0.971, "query_cover": 0.9952 } ] }
organismQuantity	703.0

id	a6b040ec-907e-41ea-972d-eb92b86aca6b
scientificName	Obelia geniculata
AphiaID	117388
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-73
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTGGGACTGGAGTCGTCGGGTCGGCCGCGAGGTCTGTTACTCGGCGGCTCTGTCATTACAATTCCCAGAGGCCTGTCGTGTGCTTCGCTGTACGCGGCAAGGGATTTGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAA
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Obelia geniculata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117388", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Obelia_geniculata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117388", "accession": "AY789769.1.1693_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Obelia_geniculata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117388", "accession": "AY789771.1.1546_U", "identity": 0.986, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Obelia_geniculata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117388", "accession": "AY789772.1.1290_U", "identity": 0.986, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Obelia_geniculata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117388", "accession": "FJ550548.1.1693_U", "identity": 0.986, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Obelia_dichotoma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117386", "accession": "AY789767.1.1692_U", "identity": 0.971, "query_cover": 0.9952 } ] }
organismQuantity	127.0

id	c9539b20-f2d8-4770-912c-e076aa7f2393
scientificName	Obelia geniculata
AphiaID	117388
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-74
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTGGGACTGGAGTCGTCGGGTCGGCCGCGAGGTCTGTTACTCGGCGGCTCTGTCATTACAATTCCCAGAGGCCTGTCGTGTGCTTCGCTGTACGCGGCAAGGGATTTGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAA
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Obelia geniculata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117388", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Obelia_geniculata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117388", "accession": "AY789769.1.1693_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Obelia_geniculata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117388", "accession": "AY789771.1.1546_U", "identity": 0.986, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Obelia_geniculata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117388", "accession": "AY789772.1.1290_U", "identity": 0.986, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Obelia_geniculata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117388", "accession": "FJ550548.1.1693_U", "identity": 0.986, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Obelia_dichotoma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117386", "accession": "AY789767.1.1692_U", "identity": 0.971, "query_cover": 0.9952 } ] }
organismQuantity	110.0

id	85b28cb2-d1f0-450d-a18f-541e5faae7fc
scientificName	Obelia geniculata
AphiaID	117388
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-75
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTGGGACTGGAGTCGTCGGGTCGGCCGCGAGGTCTGTTACTCGGCGGCTCTGTCATTACAATTCCCAGAGGCCTGTCGTGTGCTTCGCTGTACGCGGCAAGGGATTTGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAA
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Obelia geniculata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117388", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Obelia_geniculata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117388", "accession": "AY789769.1.1693_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Obelia_geniculata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117388", "accession": "AY789771.1.1546_U", "identity": 0.986, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Obelia_geniculata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117388", "accession": "AY789772.1.1290_U", "identity": 0.986, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Obelia_geniculata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117388", "accession": "FJ550548.1.1693_U", "identity": 0.986, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Obelia_dichotoma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117386", "accession": "AY789767.1.1692_U", "identity": 0.971, "query_cover": 0.9952 } ] }
organismQuantity	45.0

id	d01661ed-3719-40d1-9c93-f23b8bb6a5c8
scientificName	Obelia geniculata
AphiaID	117388
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-78
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTGGGACTGGAGTCGTCGGGTCGGCCGCGAGGTCTGTTACTCGGCGGCTCTGTCATTACAATTCCCAGAGGCCTGTCGTGTGCTTCGCTGTACGCGGCAAGGGATTTGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAA
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Obelia geniculata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117388", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Obelia_geniculata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117388", "accession": "AY789769.1.1693_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Obelia_geniculata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117388", "accession": "AY789771.1.1546_U", "identity": 0.986, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Obelia_geniculata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117388", "accession": "AY789772.1.1290_U", "identity": 0.986, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Obelia_geniculata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117388", "accession": "FJ550548.1.1693_U", "identity": 0.986, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Obelia_dichotoma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117386", "accession": "AY789767.1.1692_U", "identity": 0.971, "query_cover": 0.9952 } ] }
organismQuantity	44.0

id	c26acb47-3dc3-49ad-8f82-a392c77d7a9b
scientificName	Obelia geniculata
AphiaID	117388
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-68
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTGGGACTGGAGTCGTCGGGTCGGCCGCGAGGTCTGTTACTCGGCGGCTCTGTCATTACAATTCCCAGAGGCCTGTCGTGTGCTTCGCTGTACGCGGCAAGGGATTTGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAA
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Obelia geniculata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117388", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Obelia_geniculata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117388", "accession": "AY789769.1.1693_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Obelia_geniculata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117388", "accession": "AY789771.1.1546_U", "identity": 0.986, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Obelia_geniculata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117388", "accession": "AY789772.1.1290_U", "identity": 0.986, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Obelia_geniculata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117388", "accession": "FJ550548.1.1693_U", "identity": 0.986, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Obelia_dichotoma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117386", "accession": "AY789767.1.1692_U", "identity": 0.971, "query_cover": 0.9952 } ] }
organismQuantity	8.0

id	6116d2e3-cb0a-4f34-88cd-918c8f05f3cb
scientificName	Obelia geniculata
AphiaID	117388
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-69
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTGGGACTGGAGTCGTCGGGTCGGCCGCGAGGTCTGTTACTCGGCGGCTCTGTCATTACAATTCCCAGAGGCCTGTCGTGTGCTTCGCTGTACGCGGCAAGGGATTTGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAA
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Obelia geniculata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117388", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Obelia_geniculata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117388", "accession": "AY789769.1.1693_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Obelia_geniculata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117388", "accession": "AY789771.1.1546_U", "identity": 0.986, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Obelia_geniculata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117388", "accession": "AY789772.1.1290_U", "identity": 0.986, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Obelia_geniculata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117388", "accession": "FJ550548.1.1693_U", "identity": 0.986, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Obelia_dichotoma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117386", "accession": "AY789767.1.1692_U", "identity": 0.971, "query_cover": 0.9952 } ] }
organismQuantity	1.0

Obelia geniculata in Fiji

Status

Obelia geniculata does not have an offial status in Fiji.

Notes

No notes found.