Occurrences: |
view occurrences
id |
547646fe-0837-44db-b671-c2a403ae8f0f
|
scientificName |
Watersipora cucullata
|
AphiaID |
111590
|
eventDate |
2023-11-28
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
eventID |
SUVA3_20231128_S2A
|
materialSampleID |
USP-24-01-169
|
target_gene |
COI
|
DNA_sequence |
TTTATCATCTAATATCTCCCATAGAGGATCATCTGTAGACATAGCAATTTTTGCTCTCCACTTAGCCGGTGTATCTTCAATTCTAGGAGCTATTAACTTTATAGTAACTATCATTAATATACGAGGTAGAAAAATGTCATTCATAAATCTACCTTTATTTGTATGAGCAGTATTTATTACCGCCTTACTACTTCTTCTATCTCTCCCAGTATTAGCCGGAGCTATTACTATATTACTAACAGACCGTAATTTCAACTCCTCATTCTTTGACCCAGCAGGTGGAGGAGATCCAATTCTATACCAACACTTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Watersipora subovoidea",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111591",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Watersipora subtorquata",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111592",
"accession": "MK359658",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Watersipora subovoidea",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111591",
"accession": "JQ715459",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Watersipora subtorquata",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111592",
"accession": "MK359661",
"identity": 0.987,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Watersipora subovoidea",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111591",
"accession": "JQ715458",
"identity": 0.986,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Watersipora subtorquata",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111592",
"accession": "MK359659",
"identity": 0.984,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
983.0
|
id |
9abfac12-d441-4e5a-a493-c90222bd6a3a
|
scientificName |
Watersipora cucullata
|
AphiaID |
111590
|
eventDate |
2023-11-28
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
eventID |
SUVA3_20231128_S2B
|
materialSampleID |
USP-24-01-170
|
target_gene |
COI
|
DNA_sequence |
TTTATCATCTAATATCTCCCATAGAGGATCATCTGTAGACATAGCAATTTTTGCTCTCCACTTAGCCGGTGTATCTTCAATTCTAGGAGCTATTAACTTTATAGTAACTATCATTAATATACGAGGTAGAAAAATGTCATTCATAAATCTACCTTTATTTGTATGAGCAGTATTTATTACCGCCTTACTACTTCTTCTATCTCTCCCAGTATTAGCCGGAGCTATTACTATATTACTAACAGACCGTAATTTCAACTCCTCATTCTTTGACCCAGCAGGTGGAGGAGATCCAATTCTATACCAACACTTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Watersipora subovoidea",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111591",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Watersipora subtorquata",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111592",
"accession": "MK359658",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Watersipora subovoidea",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111591",
"accession": "JQ715459",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Watersipora subtorquata",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111592",
"accession": "MK359661",
"identity": 0.987,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Watersipora subovoidea",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111591",
"accession": "JQ715458",
"identity": 0.986,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Watersipora subtorquata",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111592",
"accession": "MK359659",
"identity": 0.984,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
56.0
|
id |
94e7cd59-9c4b-4f66-9d90-1cd4ce329f8e
|
scientificName |
Watersipora cucullata
|
AphiaID |
111590
|
eventDate |
2023-11-28
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
eventID |
SUVA3_20231128_S3A
|
materialSampleID |
USP-24-01-172
|
target_gene |
COI
|
DNA_sequence |
TTTATCATCTAATATCTCCCATAGAGGATCATCTGTAGACATAGCAATTTTTGCTCTCCACTTAGCCGGTGTATCTTCAATTCTAGGAGCTATTAACTTTATAGTAACTATCATTAATATACGAGGTAGAAAAATGTCATTCATAAATCTACCTTTATTTGTATGAGCAGTATTTATTACCGCCTTACTACTTCTTCTATCTCTCCCAGTATTAGCCGGAGCTATTACTATATTACTAACAGACCGTAATTTCAACTCCTCATTCTTTGACCCAGCAGGTGGAGGAGATCCAATTCTATACCAACACTTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Watersipora subovoidea",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111591",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Watersipora subtorquata",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111592",
"accession": "MK359658",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Watersipora subovoidea",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111591",
"accession": "JQ715459",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Watersipora subtorquata",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111592",
"accession": "MK359661",
"identity": 0.987,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Watersipora subovoidea",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111591",
"accession": "JQ715458",
"identity": 0.986,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Watersipora subtorquata",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111592",
"accession": "MK359659",
"identity": 0.984,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
5.0
|
id |
904391a6-edcd-4fab-bf15-b38cef9b16f6
|
scientificName |
Watersipora cucullata
|
AphiaID |
111590
|
eventDate |
2023-11-28
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
eventID |
SUVA3_20231128_S2A
|
materialSampleID |
USP-24-01-169
|
target_gene |
COI
|
DNA_sequence |
TGAGCAGTATTTATTACCGCCTTACTACTTCTTCTATCTCTCCCAGTATTAGCCGGAGCTATTACTATATTACTAACAGACCGTAATTTCAACTCCTCATTCTTTGACCCAGCAGGTGGAGGAGATCCAATTCTATACCAACACTTATTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Watersipora subovoidea",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111591",
"confidence": 0.93
},
{
"method": "VSEARCH",
"scientificName": "Watersipora subovoidea",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111591",
"accession": "JQ715458",
"identity": 1,
"query_cover": 0.9933
},
{
"method": "VSEARCH",
"scientificName": "Watersipora subovoidea",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111591",
"accession": "JQ715459",
"identity": 1,
"query_cover": 0.9933
},
{
"method": "VSEARCH",
"scientificName": "Watersipora subtorquata",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111592",
"accession": "MK359658",
"identity": 1,
"query_cover": 0.9933
},
{
"method": "VSEARCH",
"scientificName": "Watersipora subtorquata",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111592",
"accession": "MK359661",
"identity": 1,
"query_cover": 0.9933
},
{
"method": "VSEARCH",
"scientificName": "Watersipora subtorquata",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111592",
"accession": "MK359659",
"identity": 0.993,
"query_cover": 0.9933
}
]
}
|
organismQuantity |
1.0
|
|