Occurrences: |
view occurrences
id |
ac65f47e-e1bd-4e8b-a1bd-e6fb0e8f4139
|
scientificName |
Monetaria annulus
|
AphiaID |
216875
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
eventID |
SUVA3_20230815_PB
|
materialSampleID |
USP-24-01-145
|
target_gene |
COI
|
DNA_sequence |
TTTAGCCGGAAACCTTGCTCACGCAGGTGGGTCTGTAGATCTAGCTATTTTTTCTCTCCACCTAGCAGGTGTCTCATCTATTCTGGGTGCTGTAAACTTCATTACAACTATTATTAACATACGATGACGAGGCATGCAGTTTGAACGACTTCCCCTATTTGTATGATCTGTGAAAATTACTGCCATCCTACTTCTCCTCTCTCTACCAGTTTTAGCAGGTGCTATTACAATGTTATTAACAGACCGAAACTTTAACACCGCTTTCTTTGATCCAGCAGGAGGTGGAGACCCTATTTTATACCAACACCTGTTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "DQ206998",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "DQ324060",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "MZ559430",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "MZ560054",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "DQ206995",
"identity": 0.997,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
84.0
|
id |
55d75d65-8f23-4851-8ef0-12082543e5eb
|
scientificName |
Monetaria annulus
|
AphiaID |
216875
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
eventID |
SUVA3_20230815_PB
|
materialSampleID |
USP-24-01-145
|
target_gene |
COI
|
DNA_sequence |
TTTAGCCGGAAACCTTGCTCACGCAGGTGGGTCTGTAGATCTAGCTATTTTTTCTCTCCACCTAGCAGGTGTCTCATCTATTCTGGGTGCTGTAAACTTCATTACAACTATTATTAACATACGATGACGAGGCATGCAGTTTGAACGACTTCCCCTATTTGTATGATCTGTGAAAATTACTGCCATCCTACTTCTCCTCTCTCTACCAGTTTTAGCAGGTGCTATTACAATGTTATTAACAGACCGAAACTTTAACACCGCTTTCTTTGATCCAGCAGGAGGTGGAGACCCTATTTTATACCAGCACCTGTTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "DQ324060",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "MZ559430",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "MZ560054",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "DQ206998",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "DQ206995",
"identity": 0.997,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
1.0
|
id |
cf1f0e49-8832-4180-b3f7-cd15289f0424
|
scientificName |
Monetaria annulus
|
AphiaID |
216875
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
eventID |
SUVA3_20230815_PB
|
materialSampleID |
USP-24-01-145
|
target_gene |
COI
|
DNA_sequence |
TTTAGCCGGAAACCTTGCTCACGCAGGTGGGTCTGTAGATCTAGCTATTTTTTCTCTCCACCTAGCAGGTGTCTCATCTATTCTGGGTGCTGTAAACTTCATTACAACTATTATTAACATACGATGACGAGGCATGCAGTTTGAACGACTTCCCCTATTTGTATGATCTGTGAAAATTACTGCCATCCTACTTCTCCTCT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "DQ324060",
"identity": 1,
"query_cover": 0.995
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "MZ559430",
"identity": 1,
"query_cover": 0.995
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "MZ560054",
"identity": 1,
"query_cover": 0.995
},
{
"method": "VSEARCH",
"scientificName": "Monetaria obvelata",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:570809",
"accession": "AY161639",
"identity": 1,
"query_cover": 0.995
},
{
"method": "VSEARCH",
"scientificName": "Monetaria obvelata",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:570809",
"accession": "DQ206997",
"identity": 1,
"query_cover": 0.995
}
]
}
|
organismQuantity |
1.0
|
id |
d915c044-7877-4c8c-80ff-f2e7b923f0ab
|
scientificName |
Monetaria annulus
|
AphiaID |
216875
|
eventDate |
2023-08-15
|
decimalLongitude |
178.425933
|
decimalLatitude |
-18.1293
|
eventID |
SUVA3_20230815_PB
|
materialSampleID |
USP-24-01-145
|
target_gene |
COI
|
DNA_sequence |
TTTAGCCGGAAACCTTGCTCACGCAGGTGGGTCTGTAGATCTAGCTATTTTTTCTCTCCACCTAGCAGGTGTCTCATCTATTCTAGGTGCTGTAAACTTCATTACAACTATTATTAACATACGATGACGAGGCATGCAGTTTGAACGACTTCCCCTATTTGTATGATCTGTGAAAATTACTGCCATCCTACTTCTCCTCTCTCTACCAGTTTTAGCAGGTGCTATTACAATGTTATTAACAGACCGAAACTTTAACACCGCTTTCTTTGATCCAGCAGGAGGTGGAGACCCTATTTTATACCAACACCTGTTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "DQ206999",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "MN389075",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "MZ559397",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Monetaria annulus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:216875",
"accession": "MZ560055",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Monetaria obvelata",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:570809",
"accession": "DQ206996",
"identity": 0.997,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
1.0
|
|