PacMAN decision support system

Potential detection of Pseudopolydora achaeta in Fiji

Description:

Potential detection of Pseudopolydora achaeta with confidence low on 2024-02-28 in material sample USP-24-01-187, marker COI

Confidence:

low

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Pseudopolydora achaeta
Annelida > Polychaeta > Spionida > Spionidae
WoRMS: 331410

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

Reads:

169.0

Names:

Occurrences:

view occurrences

id	9b15c7e0-30ab-42da-b826-c542e78c71e3
scientificName	Pseudopolydora achaeta
AphiaID	331410
eventDate	2024-02-28
decimalLongitude	178.4255
decimalLatitude	-18.13163
eventID	SUVA1_20240228_PA
materialSampleID	USP-24-01-187
target_gene	COI
DNA_sequence	TTTATCTGGCAACGTTGCACACGCTGGACCTGCAGTTGATCTCACTATTCTATCCCTTCACCTTGCAGGTGTTTCCTCGCTCTTAGGGGCTATTAACTTTACAACAACCATTATAAATAGACGGATAGAAGGAATACCTTCTGAAAAAATACCATTATTTATTTGGTCCGTATTAGTAACAGTTGGACTACTAATTCTCGCACTACCTGTTCTGGCGGGAGCACTAACAATGCTCATTTTAGATCGTAATTGCAATACTACATTCTTTGAGCCGACTGGCGGAGGAGATCCAATTTTATTCCAGCATTTATTC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pseudopolydora achaeta", "scientificNameID": "urn:lsid:marinespecies.org:taxname:331410", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Pseudopolydora achaeta", "scientificNameID": "urn:lsid:marinespecies.org:taxname:331410", "accession": "MW830148", "identity": 0.971, "query_cover": 0.9968 }, { "method": "VSEARCH", "scientificName": "Pseudopolydora achaeta", "scientificNameID": "urn:lsid:marinespecies.org:taxname:331410", "accession": "MW830149", "identity": 0.971, "query_cover": 0.9968 } ] }
organismQuantity	169.0

id	5eae3040-42a7-4013-9181-da73435b5056
scientificName	Pseudopolydora achaeta
AphiaID	331410
eventDate	2024-02-28
decimalLongitude	178.42325
decimalLatitude	-18.13513
eventID	SUVA2_20240228_PA
materialSampleID	USP-24-01-190
target_gene	COI
DNA_sequence	TTTATCTGGCAACGTTGCACACGCTGGACCTGCAGTTGATCTCACTATTCTATCCCTTCACCTTGCAGGTGTTTCCTCGCTCTTAGGGGCTATTAACTTTACAACAACTATTATAAATAGACGGATAGAAGGAATACCTTCTGAAAAAATACCATTATTTATTTGGTCCGTATTAGTAACAGTTGGACTACTAATTCTCGCACTACCTGTTCTGGCGGGAGCACTAACAATGCTCATTTTAGATCGTAATTGCAATACTACATTCTTTGAGCCGACTGGCGGAGGAGATCCAATTTTATTCCAGCATTTATTC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pseudopolydora achaeta", "scientificNameID": "urn:lsid:marinespecies.org:taxname:331410", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Pseudopolydora achaeta", "scientificNameID": "urn:lsid:marinespecies.org:taxname:331410", "accession": "MW830148", "identity": 0.974, "query_cover": 0.9968 }, { "method": "VSEARCH", "scientificName": "Pseudopolydora achaeta", "scientificNameID": "urn:lsid:marinespecies.org:taxname:331410", "accession": "MW830149", "identity": 0.974, "query_cover": 0.9968 } ] }
organismQuantity	42.0

id	98e9d3b3-4bf0-4c7c-b9e6-3e025f9b96ac
scientificName	Pseudopolydora achaeta
AphiaID	331410
eventDate	2024-02-28
decimalLongitude	178.4255
decimalLatitude	-18.13163
eventID	SUVA1_20240228_PA
materialSampleID	USP-24-01-187
target_gene	COI
DNA_sequence	TTTATCTGGCAACGTTGCACACGCTGGGCCTGCAGTTGATCTCACTATTCTATCCCTTCACCTTGCAGGTGTTTCCTCGCTCTTAGGGGCTATTAACTTTACAACAACCATTATAAATAGACGGATAGAAGGAATACCTTCTGAAAAAATACCATTATTTATTTGGTCCGTATTAGTAACAGTTGGACTACTAATTCTCGCACTACCTGTTCTGGCGGGAGCACTAACAATGCTCATTTTAGATCGTAATTGCAATACTACATTCTTTGAGCCGACTGGCGGAGGAGATCCAATTTTATTCCAGCATTTATTC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pseudopolydora achaeta", "scientificNameID": "urn:lsid:marinespecies.org:taxname:331410", "confidence": 1 } ] }
organismQuantity	3.0

id	757bd766-4aca-47e0-b955-2d825df7d1b5
scientificName	Pseudopolydora achaeta
AphiaID	331410
eventDate	2024-02-28
decimalLongitude	178.42325
decimalLatitude	-18.13513
eventID	SUVA2_20240228_PA
materialSampleID	USP-24-01-190
target_gene	COI
DNA_sequence	TTTATCTGGCAACGTTGCACACGCTGGACCTGCAGTTGATCTCACTATTCTATCCCTTCACCTTGCAGGTGTTTCCTCGCTCTTAGGGGCTATTAACTTTACAACAACCATTATAAATAGACGGATAGAAGGAATACCTTCTGAAAAAATACCATTATTTATTTGGTCCGTATTAGTAACAGTTGGACTACTAATTCTCGCACTACCTGTTCTGGCGGGAGCACTAACAATGCTCATTTTAGATCGTAATTGCAATACTACATTCTTTGAGCCGACTGGCGGAGGAGATCCAATTTTATTCCAGCATTTATTC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pseudopolydora achaeta", "scientificNameID": "urn:lsid:marinespecies.org:taxname:331410", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Pseudopolydora achaeta", "scientificNameID": "urn:lsid:marinespecies.org:taxname:331410", "accession": "MW830148", "identity": 0.971, "query_cover": 0.9968 }, { "method": "VSEARCH", "scientificName": "Pseudopolydora achaeta", "scientificNameID": "urn:lsid:marinespecies.org:taxname:331410", "accession": "MW830149", "identity": 0.971, "query_cover": 0.9968 } ] }
organismQuantity	1.0

id	cdfee6c1-7a06-4ae1-a9ec-1156b4bd1332
scientificName	Pseudopolydora achaeta
AphiaID	331410
eventDate	2024-02-28
decimalLongitude	178.42325
decimalLatitude	-18.13513
eventID	SUVA2_20240228_PA
materialSampleID	USP-24-01-190
target_gene	COI
DNA_sequence	TTTATCTGGCAACGTTGCACACGCTGGACCTGCAGTTGATCTCACTATTCTATCCCTTCACCTTGCAGGTGTTTCCTCGCTCTTAGGGGCTATTAACTTTACAACAACCATTATAAATAGACGGATAGAAGGAATACCTTCTGAAAAAATACCATTATTTATTTGGTCCGTATTAGTAACAGTTGGACTACTAATTCTCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Pseudopolydora achaeta", "scientificNameID": "urn:lsid:marinespecies.org:taxname:331410", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Pseudopolydora achaeta", "scientificNameID": "urn:lsid:marinespecies.org:taxname:331410", "accession": "MW830148", "identity": 0.975, "query_cover": 0.995 }, { "method": "VSEARCH", "scientificName": "Pseudopolydora achaeta", "scientificNameID": "urn:lsid:marinespecies.org:taxname:331410", "accession": "MW830149", "identity": 0.975, "query_cover": 0.995 } ] }
organismQuantity	1.0

Pseudopolydora achaeta does not have an offial status in Fiji.

No notes found.