PacMAN decision support system

Potential detection of Ecteinascidia turbinata in Fiji

Description:

Potential detection of Ecteinascidia turbinata with confidence low on 2023-08-15 in material sample USP-24-01-36, marker 18S

Confidence:

low

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Ecteinascidia turbinata
Chordata > Ascidiacea > Phlebobranchia > Perophoridae
WoRMS: 103756

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

0.995

Reads:

4.0

Names:

1

Occurrences:

view occurrences

id	720f7dad-20b1-43d2-968f-09664afb9db1
scientificName	Ecteinascidia turbinata
AphiaID	103756
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-36
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGCTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGTCCTGGCCTCACCTCCGGTTCCCCGCCGGTGCTCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ecteinascidia turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "confidence": 0.9 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "accession": "EU662244.1.1230_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "accession": "EU662235.1.1233_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "accession": "EU662245.1.957_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "accession": "EU662236.1.1228_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Perophora_sagamiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250618", "accession": "AB104873.1.1720_U", "identity": 0.986, "query_cover": 0.9952 } ] }
organismQuantity	4.0

id	5f3aa744-7e79-488c-bd41-219b1e9db5f0
scientificName	Ecteinascidia turbinata
AphiaID	103756
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-55
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGCTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGTCCTGGCCTCACCTCCGGTTCCCCGCCGGTGCTCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ecteinascidia turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "confidence": 0.9 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "accession": "EU662244.1.1230_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "accession": "EU662235.1.1233_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "accession": "EU662245.1.957_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "accession": "EU662236.1.1228_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Perophora_sagamiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250618", "accession": "AB104873.1.1720_U", "identity": 0.986, "query_cover": 0.9952 } ] }
organismQuantity	3.0

id	67a926f6-c8b5-4244-9bb8-51dfb75dc45d
scientificName	Ecteinascidia turbinata
AphiaID	103756
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-38
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGCTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGTCCTGGCCTCACCTCCGGTTCCCCGCCGGTGCTCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ecteinascidia turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "confidence": 0.9 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "accession": "EU662244.1.1230_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "accession": "EU662235.1.1233_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "accession": "EU662245.1.957_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "accession": "EU662236.1.1228_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Perophora_sagamiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250618", "accession": "AB104873.1.1720_U", "identity": 0.986, "query_cover": 0.9952 } ] }
organismQuantity	1.0

id	ebafe4b2-8e7c-46cc-abf6-41afa30fa816
scientificName	Ecteinascidia turbinata
AphiaID	103756
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-57
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGCTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGTCCTGGCCTCACCTCCGGTTCCCCGCCGGTGCTCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ecteinascidia turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "confidence": 0.9 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "accession": "EU662244.1.1230_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "accession": "EU662235.1.1233_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "accession": "EU662245.1.957_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "accession": "EU662236.1.1228_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Perophora_sagamiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250618", "accession": "AB104873.1.1720_U", "identity": 0.986, "query_cover": 0.9952 } ] }
organismQuantity	1.0

id	f13e6aaa-bc32-485e-886f-6b493bb2d77a
scientificName	Ecteinascidia turbinata
AphiaID	103756
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-54
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGCTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGTCCTGGCCTCACCTCCGGTTCCCCGCCGGTGCTCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ecteinascidia turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "confidence": 0.9 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "accession": "EU662244.1.1230_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "accession": "EU662235.1.1233_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "accession": "EU662245.1.957_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "accession": "EU662236.1.1228_U", "identity": 0.99, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Perophora_sagamiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250618", "accession": "AB104873.1.1720_U", "identity": 0.986, "query_cover": 0.9952 } ] }
organismQuantity	1.0

id	def1084b-862c-41ff-a40f-6d6ce78c33b2
scientificName	Ecteinascidia turbinata
AphiaID	103756
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-37
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGCTGCGGTTAAAAAGCTCGTAGTTGGACTTTGGGCGCGGGCGGCCGGTCCGTCGAAAGGCGTGCACTGGCCGTTCCCGGCCTCGACCTCCGGTTTCCCGCCGGTGCTCTTGACTGAGTGTCGGCGGCGGCCGGAACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ecteinascidia turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "confidence": 0.99 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "accession": "EU662238.1.1220_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	5.0

id	9e872301-4de5-483e-8c0f-d694d993de39
scientificName	Ecteinascidia turbinata
AphiaID	103756
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-49
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGCTGCGGTTAAAAAGCTCGTAGTTGGACTTTGGGCGCGGGCGGCCGGTCCGTCGAAAGGCGTGCACTGGCCGTTCCCGGCCTCGACCTCCGGTTTCCCGCCGGTGCTCTTGACTGAGTGTCGGCGGCGGCCGGAACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ecteinascidia turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "confidence": 0.99 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "accession": "EU662238.1.1220_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	3.0

id	8a6987d8-64c0-4539-9e8a-bf4a2ff61ddf
scientificName	Ecteinascidia turbinata
AphiaID	103756
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-38
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGCTGCGGTTAAAAAGCTCGTAGTTGGACTTTGGGCGCGGGCGGCCGGTCCGTCGAAAGGCGTGCACTGGCCGTTCCCGGCCTCGACCTCCGGTTTCCCGCCGGTGCTCTTGACTGAGTGTCGGCGGCGGCCGGAACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Ecteinascidia turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "confidence": 0.99 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "accession": "EU662238.1.1220_U", "identity": 0.99, "query_cover": 0.9952 } ] }
organismQuantity	1.0

Ecteinascidia turbinata in Fiji

Status

Ecteinascidia turbinata does not have an offial status in Fiji.

Notes

No notes found.