| Occurrences: |
view occurrences
| id |
61e486fb-2827-4442-9c7f-50c2c6a5730a
|
| scientificName |
Macrorhynchia philippina
|
| AphiaID |
117305
|
| eventDate |
2024-02-28
|
| decimalLongitude |
178.42325
|
| decimalLatitude |
-18.13513
|
| eventID |
SUVA2_20240228_S2B
|
| materialSampleID |
USP-24-01-213
|
| target_gene |
COI
|
| DNA_sequence |
TTTATCAGGTCCAATAGCTCACTCTGGAAGTTCAGTTGATTTAGCTATATTTAGTCTTCATTGTGCAGGTGCTTCTTCTATTATGGGTGCCATTAATTTCATTATAACCATATTTAATATGAGAACTCCAAGTATGACAATGGATAAAATTCCTTTATTTGTATGATCTGTTTTAATTACAGCCTTCCTATTATTATTATCTTTACCAGTATTAGCAGGAGCTATAACTATGTTATTAACTGACCGTAATTTTAATACTACTTTTTTTGACCCAACAGGAGGTGGAGATCCTATCCTATACCAACATTTATTT
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Macrorhynchia philippina",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117305",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Macrorhynchia philippina",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117305",
"accession": "MH282740",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Macrorhynchia philippina",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117305",
"accession": "MH282730",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Macrorhynchia philippina",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117305",
"accession": "MH282727",
"identity": 0.993,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Macrorhynchia philippina",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117305",
"accession": "MH282732",
"identity": 0.993,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Macrorhynchia philippina",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117305",
"accession": "MH282733",
"identity": 0.993,
"query_cover": 0.9968
}
]
}
|
| organismQuantity |
31.0
|
| id |
6a640179-e354-47c7-ae66-ccc1919ffbf0
|
| scientificName |
Macrorhynchia philippina
|
| AphiaID |
117305
|
| eventDate |
2024-02-28
|
| decimalLongitude |
178.42325
|
| decimalLatitude |
-18.13513
|
| eventID |
SUVA2_20240228_S2C
|
| materialSampleID |
USP-24-01-214
|
| target_gene |
COI
|
| DNA_sequence |
TTTATCAGGTCCAATAGCTCACTCTGGAAGTTCAGTTGATTTAGCTATATTTAGTCTTCATTGTGCAGGTGCTTCTTCTATTATGGGTGCCATTAATTTCATTATAACCATATTTAATATGAGAACTCCAAGTATGACAATGGATAAAATTCCTTTATTTGTATGATCTGTTTTAATTACAGCCTTCCTATTATTATTATCTTTACCAGTATTAGCAGGAGCTATAACTATGTTATTAACTGACCGTAATTTTAATACTACTTTTTTTGACCCAACAGGAGGTGGAGATCCTATCCTATACCAACATTTATTT
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Macrorhynchia philippina",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117305",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Macrorhynchia philippina",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117305",
"accession": "MH282740",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Macrorhynchia philippina",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117305",
"accession": "MH282730",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Macrorhynchia philippina",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117305",
"accession": "MH282727",
"identity": 0.993,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Macrorhynchia philippina",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117305",
"accession": "MH282732",
"identity": 0.993,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Macrorhynchia philippina",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117305",
"accession": "MH282733",
"identity": 0.993,
"query_cover": 0.9968
}
]
}
|
| organismQuantity |
4.0
|
|