| Occurrences: |
view occurrences
| id |
c6ad432f-cf6d-4996-9611-b1997de34b73
|
| scientificName |
Ophiactis savignyi
|
| AphiaID |
125122
|
| eventDate |
2022-02-01
|
| decimalLongitude |
178.42325
|
| decimalLatitude |
-18.13513
|
| materialSampleID |
S97
|
| target_gene |
COI
|
| DNA_sequence |
TTTATCTGGCCCAACCGCCCACGCAGGAGGGTGTGTAGACCTCGCAATCTTTTCCCTACACCTGGCCGGAGCCTCATCTATTATGGCCTCTATAAACTTTATAACCACTATTCTTAACATGCGGGCCCCCGGAATGACCATGGACCGTATGCCACTTTTCGTTTGATCTATTTTATTAACGACAATCCTCCTCTTACTCTCCCTACCTGTTCTAGCCGGAGCCATCACTATGCTCCTCACAGACCGAAAAATTAACACTACCTTCTTCGACCCAACAGGGGGAGGAGACCCTATTTTATTTCAACACTTGTTC
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Ophiactis savignyi",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:125122",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Ophiactis savignyi",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:125122",
"accession": "GU480578",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Ophiactis savignyi",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:125122",
"accession": "MZ560288",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Ophiactis savignyi",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:125122",
"accession": "KY263280",
"identity": 0.984,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Ophiactis savignyi",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:125122",
"accession": "MN690259",
"identity": 0.978,
"query_cover": 0.9968
}
]
}
|
| organismQuantity |
153.0
|
| id |
6651333a-a284-4a3b-8753-9339daa843dc
|
| scientificName |
Ophiactis savignyi
|
| AphiaID |
125122
|
| eventDate |
2022-02-01
|
| decimalLongitude |
178.42325
|
| decimalLatitude |
-18.13513
|
| materialSampleID |
S105
|
| target_gene |
COI
|
| DNA_sequence |
TTTATCTGGCCCAACCGCCCACGCAGGAGGGTGTGTAGACCTCGCAATCTTTTCCCTACACCTGGCCGGAGCCTCATCTATTATGGCCTCTATAAACTTTATAACCACTATTCTTAACATGCGGGCCCCCGGAATGACCATGGACCGTATGCCACTTTTCGTTTGATCTATTTTATTAACGACAATCCTCCTCTTACTCTCCCTACCTGTTCTAGCCGGAGCCATCACTATGCTCCTCACAGACCGAAAAATTAACACTACCTTCTTCGACCCAACAGGGGGAGGAGACCCTATTTTATTTCAACACTTGTTC
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Ophiactis savignyi",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:125122",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Ophiactis savignyi",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:125122",
"accession": "GU480578",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Ophiactis savignyi",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:125122",
"accession": "MZ560288",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Ophiactis savignyi",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:125122",
"accession": "KY263280",
"identity": 0.984,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Ophiactis savignyi",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:125122",
"accession": "MN690259",
"identity": 0.978,
"query_cover": 0.9968
}
]
}
|
| organismQuantity |
3.0
|
| id |
ab277cfd-446c-45f0-88d3-57534c876e13
|
| scientificName |
Ophiactis savignyi
|
| AphiaID |
125122
|
| eventDate |
2022-02-01
|
| decimalLongitude |
178.42325
|
| decimalLatitude |
-18.13513
|
| materialSampleID |
S97
|
| target_gene |
COI
|
| DNA_sequence |
TTTATCTGGCCCAACCGCCCACGCAGGAGGGTGTGTAGACCTCGCAATCTTTTCCCTACACCTGGCCGGAGCCTCATCTATTATGGCCTCTATAAACTTTATAACCACTATTCTTAACATGCGGGCCCCCGGAATGACCATGGACCGTATGCCACTTTTCGTTTGATCTATTTTATTAACGACAATCCTCCTCTTACTCTCCTTACCTGTTCTAGCCGGAGCCATCACTATGCTCCTCACAGACCGAAAAATTAACACTACCTTCTTCGACCCAACAGGGGGAGGAGACCCTATTTTATTTCAACACTTGTTC
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Ophiactis savignyi",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:125122",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Ophiactis savignyi",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:125122",
"accession": "GU480578",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Ophiactis savignyi",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:125122",
"accession": "MZ560288",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Ophiactis savignyi",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:125122",
"accession": "KY263280",
"identity": 0.987,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Ophiactis savignyi",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:125122",
"accession": "MN690259",
"identity": 0.981,
"query_cover": 0.9968
}
]
}
|
| organismQuantity |
1.0
|
|