| Occurrences: |
view occurrences
| id |
d30ebec7-33a4-4ec2-a3e4-ed364407636d
|
| scientificName |
Ophiactis savignyi
|
| AphiaID |
125122
|
| eventDate |
2023-11-28
|
| decimalLongitude |
178.425933
|
| decimalLatitude |
-18.1293
|
| eventID |
SUVA3_20231128_S2B
|
| materialSampleID |
USP-24-01-170
|
| target_gene |
COI
|
| DNA_sequence |
TTTATCTGGCCCAACCGCCCACGCAGGAGGGTGTGTAGACCTCGCGATCTTTTCTCTACACCTGGCCGGAGCCTCATCTATTATGGCCTCTATAAACTTTATAACCACTATTCTTAACATGCGGGCCCCCGGAATGACCATGGACCGTATGCCACTTTTCGTTTGATCTATTTTATTAACGACAATCCTCCTCTTACTCTCCTTACCTGTTCTAGCCGGAGCCATCACTATGCTCCTCACAGACCGAAAAATTAACACTACCTTCTTCGACCCAACAGGGGGAGGAGACCCTATTTTATTTCAACACTTGTTC
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Ophiactis savignyi",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:125122",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Ophiactis savignyi",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:125122",
"accession": "KY263280",
"identity": 0.994,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Ophiactis savignyi",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:125122",
"accession": "GU480578",
"identity": 0.99,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Ophiactis savignyi",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:125122",
"accession": "MZ560288",
"identity": 0.99,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Ophiactis savignyi",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:125122",
"accession": "MN690259",
"identity": 0.987,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Ophiactis savignyi",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:125122",
"accession": "KM234230",
"identity": 0.971,
"query_cover": 0.9968
}
]
}
|
| organismQuantity |
9.0
|
| id |
9ed77108-497f-48d4-8353-e5e0d00300a6
|
| scientificName |
Ophiactis savignyi
|
| AphiaID |
125122
|
| eventDate |
2023-11-28
|
| decimalLongitude |
178.425933
|
| decimalLatitude |
-18.1293
|
| eventID |
SUVA3_20231128_S2B
|
| materialSampleID |
USP-24-01-170
|
| target_gene |
COI
|
| DNA_sequence |
CTTATCTGGCCCAACCGCCCACGCAGGAGGGTGTGTAGACCTCGCGATCTTTTCTCTACACCTGGCCGGAGCCTCATCTATTATGGCCTCTATAAACTTTATAACCACTATTCTTAACATGCGGGCCCCTGGAATGACCATGGACCGTATGCCTCTTTTCGTTTGATCCATTTTGTTAACCACAATCCTCCTCCTGCTCTCCTTACCTGTTCTAGCCGGAGCCATCACCATGCTCCTCACAGACCGAAAAATTAACACTACCTTCTTCGATCCAACAGGGGGAGGAGACCCTATTTTATTTCAACACTTGTTC
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Ophiactis savignyi",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:125122",
"confidence": 0.99
},
{
"method": "VSEARCH",
"scientificName": "Ophiactis savignyi",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:125122",
"accession": "KM234230",
"identity": 0.974,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Ophiactis savignyi",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:125122",
"accession": "KP254102",
"identity": 0.974,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Ophiactis savignyi",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:125122",
"accession": "MZ539820",
"identity": 0.971,
"query_cover": 0.9968
}
]
}
|
| organismQuantity |
30.0
|
| id |
677dfaea-43eb-4006-8257-bb6048a1f0c0
|
| scientificName |
Ophiactis savignyi
|
| AphiaID |
125122
|
| eventDate |
2023-11-28
|
| decimalLongitude |
178.425933
|
| decimalLatitude |
-18.1293
|
| eventID |
SUVA3_20231128_S3B
|
| materialSampleID |
USP-24-01-173
|
| target_gene |
COI
|
| DNA_sequence |
CTTATCTGGCCCAACCGCCCACGCAGGAGGGTGTGTAGACCTCGCGATCTTTTCTCTACACCTGGCCGGAGCCTCATCTATTATGGCCTCTATAAACTTTATAACCACTATTCTTAACATGCGGGCCCCTGGAATGACCATGGACCGTATGCCTCTTTTCGTTTGATCCATTTTGTTAACCACAATCCTCCTCCTGCTCTCCTTACCTGTTCTAGCCGGAGCCATCACCATGCTCCTCACAGACCGAAAAATTAACACTACCTTCTTCGATCCAACAGGGGGAGGAGACCCTATTTTATTTCAACACTTGTTC
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Ophiactis savignyi",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:125122",
"confidence": 0.99
},
{
"method": "VSEARCH",
"scientificName": "Ophiactis savignyi",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:125122",
"accession": "KM234230",
"identity": 0.974,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Ophiactis savignyi",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:125122",
"accession": "KP254102",
"identity": 0.974,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Ophiactis savignyi",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:125122",
"accession": "MZ539820",
"identity": 0.971,
"query_cover": 0.9968
}
]
}
|
| organismQuantity |
3.0
|
|