PacMAN decision support system

Potential detection of Clytia linearis in Fiji

Description:

Potential detection of Clytia linearis with confidence low on 2023-08-24 in material sample USP-24-01-65, marker 18S

Confidence:

low

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Clytia linearis
Cnidaria > Hydrozoa > Leptothecata > Campanulariidae
WoRMS: 117370

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

1.0

Reads:

84.0

Names:

Occurrences:

view occurrences

id	8dcb2fef-6808-48ec-a7cf-2c5cd45e9bae
scientificName	Clytia
eventDate	2023-08-24
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-65
target_gene	18S
DNA_sequence	TTGTTGGTTTCTAAAACCGCAGTAATGATTAAGAGGGACAATTGGGGGCGTCCGTATTTCGTTGTCAGAGGTGAAATTCTTGGATTTACGAAAGACGAACAACTGCGAAAGCATTCGCCAAGAGTGTTTTCATTAATCAAGAACGAAAGTTAGAGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Clytia", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117030", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Clytia_linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "accession": "AY789747.1.1693_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Clytia_linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "accession": "DQ064794.1.1691_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Clytia_linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "accession": "AY789748.1.1565_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Clytia_sp.", "accession": "KF962233.1.1714_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Clytia_sp.", "accession": "KF962234.1.1714_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	84.0

id	a9a4d5a0-25ae-4de7-a119-de07c35948a7
scientificName	Clytia
eventDate	2023-08-24
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-64
target_gene	18S
DNA_sequence	TTGTTGGTTTCTAAAACCGCAGTAATGATTAAGAGGGACAATTGGGGGCGTCCGTATTTCGTTGTCAGAGGTGAAATTCTTGGATTTACGAAAGACGAACAACTGCGAAAGCATTCGCCAAGAGTGTTTTCATTAATCAAGAACGAAAGTTAGAGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Clytia", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117030", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Clytia_linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "accession": "AY789747.1.1693_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Clytia_linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "accession": "DQ064794.1.1691_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Clytia_linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "accession": "AY789748.1.1565_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Clytia_sp.", "accession": "KF962233.1.1714_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Clytia_sp.", "accession": "KF962234.1.1714_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	51.0

id	ecb0e5a3-9d9d-4a4d-b069-f488bfc6264d
scientificName	Clytia linearis
AphiaID	117370
eventDate	2023-08-24
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-64
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTGGGGCGCTGGTGGGACGGTCGGCCGCGAGGTCTGTTACTGTCTCTCCGTGCCATCACATTCTCGGAGACCCGTCGTGCACTTCGCTGTGCGCGGCGTGGGACTCGAGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Clytia linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Clytia_linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "accession": "AY789747.1.1693_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Clytia_linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "accession": "DQ064794.1.1691_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Clytia_linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "accession": "AY789748.1.1565_U", "identity": 1, "query_cover": 0.9952 } ] }
organismQuantity	50.0

id	69a77b3b-6572-4480-9401-c850a03044a9
scientificName	Clytia linearis
AphiaID	117370
eventDate	2023-08-24
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-64
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTGGGGCGCTGGTGGGACGGTCGGCCGCGAGGTCTGTTACTGTCTCTCCGTGCCATCACATTCTCGGAGACCCGTCGTGCACTTCGCTGTTCGCGGCGTGGGACTCGAGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Clytia linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Clytia_linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "accession": "AY789747.1.1693_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Clytia_linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "accession": "DQ064794.1.1691_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Clytia_linearis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117370", "accession": "AY789748.1.1565_U", "identity": 0.995, "query_cover": 0.9952 } ] }
organismQuantity	2.0

Clytia linearis in Fiji

Status

Clytia linearis does not have an offial status in Fiji.

Notes

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