| Occurrences: |
view occurrences
| id |
6cc6792d-dc1b-430a-9ddf-b9eb8fefdcc1
|
| scientificName |
Monodactylus argenteus
|
| AphiaID |
218695
|
| eventDate |
2022-02-01
|
| decimalLongitude |
178.4255
|
| decimalLatitude |
-18.13163
|
| materialSampleID |
S108
|
| target_gene |
COI
|
| DNA_sequence |
ATTAGCTGGTAACCTGGCACATGCTGGAGCATCTGTTGATCTAACTATTTTTTCCCTTCACCTTGCGGGTGTATCCTCTATTCTAGGGGCCATTAATTTTATTACAACTATTATCAACATAAAACCGCCAGCTATTTCTCAATATCAAACTCCTCTATTTGTATGAGCTGTCCTAATTACTGCTGTCCTGCTTCTTCTCTCTCTCCCAGTGCTTGCTGCTGGCATTACAATACTCCTTACAGATCGAAATCTAAACACAACTTTCTTCGATCCGGCAGGAGGAGGAGACCCAATTCTCTACCAACACCTATTC
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Monodactylus argenteus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:218695",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Monodactylus_argenteus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:218695",
"accession": "DQ107780",
"identity": 0.99,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Monodactylus_argenteus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:218695",
"accession": "KJ669533",
"identity": 0.99,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Monodactylus_argenteus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:218695",
"accession": "KU944175",
"identity": 0.986,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Monodactylus_argenteus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:218695",
"accession": "KU944176",
"identity": 0.986,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Pelates quadrilineatus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:127077",
"accession": "KU944283",
"identity": 0.986,
"query_cover": 0.9968
}
]
}
|
| organismQuantity |
10.0
|
| id |
9fa7ee1d-7e29-43b4-898e-67d190020913
|
| scientificName |
Monodactylus argenteus
|
| AphiaID |
218695
|
| eventDate |
2022-02-01
|
| decimalLongitude |
178.4255
|
| decimalLatitude |
-18.13163
|
| materialSampleID |
S107
|
| target_gene |
COI
|
| DNA_sequence |
ATTAGCTGGTAACCTGGCACATGCTGGAGCATCTGTTGATCTAACTATTTTTTCCCTTCACCTTGCGGGTGTATCCTCTATTCTAGGGGCCATTAATTTTATTACAACTATTATCAACATAAAACCGCCAGCTATTTCTCAATATCAAACTCCTCTATTTGTATGAGCTGTCCTAATTACTGCTGTCCTGCTTCTTCTCTCTCTCCCAGTGCTTGCTGCTGGCATTACAATACTCCTTACAGATCGAAATCTAAACACAACTTTCTTCGATCCGGCAGGAGGAGGAGACCCAATTCTCTACCAACACCTATTC
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Monodactylus argenteus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:218695",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Monodactylus_argenteus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:218695",
"accession": "DQ107780",
"identity": 0.99,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Monodactylus_argenteus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:218695",
"accession": "KJ669533",
"identity": 0.99,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Monodactylus_argenteus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:218695",
"accession": "KU944175",
"identity": 0.986,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Monodactylus_argenteus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:218695",
"accession": "KU944176",
"identity": 0.986,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Pelates quadrilineatus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:127077",
"accession": "KU944283",
"identity": 0.986,
"query_cover": 0.9968
}
]
}
|
| organismQuantity |
4.0
|
|