| Occurrences: |
view occurrences
| id |
6cdb028c-7b7f-4858-bf49-b3ea267ca189
|
| scientificName |
Perophora viridis
|
| AphiaID |
103761
|
| eventDate |
2024-02-28
|
| decimalLongitude |
178.42325
|
| decimalLatitude |
-18.13513
|
| eventID |
SUVA2_20240228_S2C
|
| materialSampleID |
USP-24-01-214
|
| target_gene |
COI
|
| DNA_sequence |
ATTGTCTAGTGGTATCGCTCATTCTGGGCCTGCCGTGGATTGTGCTATTTTTTCCCTTCACTTGGCTGGGGTTTCTAGTATCCTGGGTTCTATGAACTTTTTGGTTACTATTATAAATATGAAAGTTAAGGGGTTTGGAATGATAGATTTGACATTGTTTTGTTGATCTATTGTTTTTACAACAATTTTGTTGGTTTTATCTCTTCCTGTTTTAGCTGCTGCTATTACTATGCTTTTATTAGACCGTAATATTAATACGAGTTTCTTTGATCCTGGTGGTAGGGGAGACCCAATTCTATTTCAACATTTGTTT
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Perophora viridis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103761",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Perophora viridis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103761",
"accession": "MT637972",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Perophora viridis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103761",
"accession": "OM912739",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Perophora viridis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103761",
"accession": "OM912740",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Perophora viridis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103761",
"accession": "OM912741",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Perophora viridis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103761",
"accession": "MW621883",
"identity": 0.997,
"query_cover": 0.9968
}
]
}
|
| organismQuantity |
47.0
|
| id |
f61d617a-dccb-4484-ad1a-543042877855
|
| scientificName |
Perophora viridis
|
| AphiaID |
103761
|
| eventDate |
2024-02-28
|
| decimalLongitude |
178.42325
|
| decimalLatitude |
-18.13513
|
| eventID |
SUVA2_20240228_S2B
|
| materialSampleID |
USP-24-01-213
|
| target_gene |
COI
|
| DNA_sequence |
ATTGTCTAGTGGTATCGCTCATTCTGGGCCTGCCGTGGATTGTGCTATTTTTTCCCTTCACTTGGCTGGGGTTTCTAGTATCCTGGGTTCTATGAACTTTTTGGTTACTATTATAAATATGAAAGTTAAGGGGTTTGGAATGATAGATTTGACATTGTTTTGTTGATCTATTGTTTTTACAACAATTTTGTTGGTTTTATCTCTTCCTGTTTTAGCTGCTGCTATTACTATGCTTTTATTAGACCGTAATATTAATACGAGTTTCTTTGATCCTGGTGGTAGGGGAGACCCAATTCTATTTCAACATTTGTTT
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Perophora viridis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103761",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Perophora viridis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103761",
"accession": "MT637972",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Perophora viridis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103761",
"accession": "OM912739",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Perophora viridis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103761",
"accession": "OM912740",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Perophora viridis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103761",
"accession": "OM912741",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Perophora viridis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:103761",
"accession": "MW621883",
"identity": 0.997,
"query_cover": 0.9968
}
]
}
|
| organismQuantity |
11.0
|
|