PacMAN decision support system

Potential detection of Antennella secundaria in Fiji

Description:

Potential detection of Antennella secundaria with confidence low on 2024-02-28 in material sample USP-24-01-200, marker 18S

Confidence:

low

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Antennella secundaria
Cnidaria > Hydrozoa > Leptothecata > Halopterididae
WoRMS: 117628

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

1.0

Reads:

265.0

Names:

Occurrences:

view occurrences

id	96d20a1e-8faf-4ea6-9d0a-8b78cb68e814
scientificName	Macrorhynchia phoenicea
AphiaID	284199
eventDate	2024-02-28
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-200
target_gene	18S
DNA_sequence	TCGTTGGTTTCGAGGACCGAAGTAATGATTAAGAGGGACAGTTGGGGGCATCCGTATTTCGTAGTCAGAGGTGAAATTCTTGGATCTACGAAAGACGAACAACTGCGAAAGCATTTGCCAAGAGTGTTTTCATTAATCAAGAACGAAAGTTAGAGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Macrorhynchia phoenicea", "scientificNameID": "urn:lsid:marinespecies.org:taxname:284199", "confidence": 0.9 }, { "method": "VSEARCH", "scientificName": "Gymnangium_hians", "scientificNameID": "urn:lsid:marinespecies.org:taxname:220593", "accession": "Z86122.1.1808_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Antennella_secundaria", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117628", "accession": "FJ550575.1.1716_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Macrorhynchia_sibogae", "scientificNameID": "urn:lsid:marinespecies.org:taxname:284204", "accession": "FJ550586.1.1685_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Antennella_kiwiana", "scientificNameID": "urn:lsid:marinespecies.org:taxname:284814", "accession": "FJ550534.1.1717_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halopteris_carinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:287297", "accession": "FJ550576.1.1717_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	265.0

id	e20a1d93-21dc-4a3b-bb43-0f0192ab699e
scientificName	Macrorhynchia phoenicea
AphiaID	284199
eventDate	2024-02-28
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-201
target_gene	18S
DNA_sequence	TCGTTGGTTTCGAGGACCGAAGTAATGATTAAGAGGGACAGTTGGGGGCATCCGTATTTCGTAGTCAGAGGTGAAATTCTTGGATCTACGAAAGACGAACAACTGCGAAAGCATTTGCCAAGAGTGTTTTCATTAATCAAGAACGAAAGTTAGAGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Macrorhynchia phoenicea", "scientificNameID": "urn:lsid:marinespecies.org:taxname:284199", "confidence": 0.9 }, { "method": "VSEARCH", "scientificName": "Gymnangium_hians", "scientificNameID": "urn:lsid:marinespecies.org:taxname:220593", "accession": "Z86122.1.1808_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Antennella_secundaria", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117628", "accession": "FJ550575.1.1716_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Macrorhynchia_sibogae", "scientificNameID": "urn:lsid:marinespecies.org:taxname:284204", "accession": "FJ550586.1.1685_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Antennella_kiwiana", "scientificNameID": "urn:lsid:marinespecies.org:taxname:284814", "accession": "FJ550534.1.1717_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halopteris_carinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:287297", "accession": "FJ550576.1.1717_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	81.0

id	f9b7da49-c3fe-4d1b-bcdb-6d3994f3d408
scientificName	Macrorhynchia phoenicea
AphiaID	284199
eventDate	2024-02-28
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	USP-24-01-94
target_gene	18S
DNA_sequence	TCGTTGGTTTCGAGGACCGAAGTAATGATTAAGAGGGACAGTTGGGGGCATCCGTATTTCGTAGTCAGAGGTGAAATTCTTGGATCTACGAAAGACGAACAACTGCGAAAGCATTTGCCAAGAGTGTTTTCATTAATCAAGAACGAAAGTTAGAGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Macrorhynchia phoenicea", "scientificNameID": "urn:lsid:marinespecies.org:taxname:284199", "confidence": 0.9 }, { "method": "VSEARCH", "scientificName": "Gymnangium_hians", "scientificNameID": "urn:lsid:marinespecies.org:taxname:220593", "accession": "Z86122.1.1808_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Antennella_secundaria", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117628", "accession": "FJ550575.1.1716_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Macrorhynchia_sibogae", "scientificNameID": "urn:lsid:marinespecies.org:taxname:284204", "accession": "FJ550586.1.1685_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Antennella_kiwiana", "scientificNameID": "urn:lsid:marinespecies.org:taxname:284814", "accession": "FJ550534.1.1717_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halopteris_carinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:287297", "accession": "FJ550576.1.1717_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	21.0

id	7147bc10-b57c-429e-8eea-f480405925a0
scientificName	Macrorhynchia phoenicea
AphiaID	284199
eventDate	2024-02-28
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-93
target_gene	18S
DNA_sequence	TCGTTGGTTTCGAGGACCGAAGTAATGATTAAGAGGGACAGTTGGGGGCATCCGTATTTCGTAGTCAGAGGTGAAATTCTTGGATCTACGAAAGACGAACAACTGCGAAAGCATTTGCCAAGAGTGTTTTCATTAATCAAGAACGAAAGTTAGAGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Macrorhynchia phoenicea", "scientificNameID": "urn:lsid:marinespecies.org:taxname:284199", "confidence": 0.9 }, { "method": "VSEARCH", "scientificName": "Gymnangium_hians", "scientificNameID": "urn:lsid:marinespecies.org:taxname:220593", "accession": "Z86122.1.1808_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Antennella_secundaria", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117628", "accession": "FJ550575.1.1716_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Macrorhynchia_sibogae", "scientificNameID": "urn:lsid:marinespecies.org:taxname:284204", "accession": "FJ550586.1.1685_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Antennella_kiwiana", "scientificNameID": "urn:lsid:marinespecies.org:taxname:284814", "accession": "FJ550534.1.1717_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halopteris_carinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:287297", "accession": "FJ550576.1.1717_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	2.0

id	d99c27c1-aa5c-49e1-87dd-2fb198214846
scientificName	Macrorhynchia phoenicea
AphiaID	284199
eventDate	2024-02-28
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	USP-24-01-193
target_gene	18S
DNA_sequence	TCGTTGGTTTCGAGGACCGAAGTAATGATTAAGAGGGACAGTTGGGGGCATCCGTATTTCGTAGTCAGAGGTGAAATTCTTGGATCTACGAAAGACGAACAACTGCGAAAGCATTTGCCAAGAGTGTTTTCATTAATCAAGAACGAAAGTTAGAGGATCG
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Macrorhynchia phoenicea", "scientificNameID": "urn:lsid:marinespecies.org:taxname:284199", "confidence": 0.9 }, { "method": "VSEARCH", "scientificName": "Gymnangium_hians", "scientificNameID": "urn:lsid:marinespecies.org:taxname:220593", "accession": "Z86122.1.1808_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Antennella_secundaria", "scientificNameID": "urn:lsid:marinespecies.org:taxname:117628", "accession": "FJ550575.1.1716_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Macrorhynchia_sibogae", "scientificNameID": "urn:lsid:marinespecies.org:taxname:284204", "accession": "FJ550586.1.1685_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Antennella_kiwiana", "scientificNameID": "urn:lsid:marinespecies.org:taxname:284814", "accession": "FJ550534.1.1717_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Halopteris_carinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:287297", "accession": "FJ550576.1.1717_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	1.0

Antennella secundaria in Fiji

Status

Antennella secundaria does not have an offial status in Fiji.

Notes

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