PacMAN decision support system

Potential detection of Perophora japonica in Fiji

Description:

Potential detection of Perophora japonica with confidence medium on 2022-05-25 in material sample S46, marker 18S

Confidence:

medium

Risk:

medium view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Perophora japonica
Chordata > Ascidiacea > Phlebobranchia > Perophoridae
WoRMS: 103758

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

1.0

Reads:

24.0

Names:

Occurrences:

view occurrences

id	7309b446-4e3c-40b7-b455-ed3fc6b07dc6
scientificName	Perophora japonica
AphiaID	103758
eventDate	2022-05-25
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S46
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGCTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGACCTGGCCTTACCTTCGGTTCCCCGCCGGTGCTCTTGACTGAGTGTCGGCGGCGGCCGGAACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Perophora japonica", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103758", "confidence": 0.94 }, { "method": "VSEARCH", "scientificName": "Perophora_japonica", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103758", "accession": "AB499607.1.1752_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_herdmanni", "accession": "FM244847.1.1607_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Perophora_sagamiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250618", "accession": "AB104873.1.1720_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "accession": "EU662244.1.1230_U", "identity": 0.986, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "accession": "EU662235.1.1233_U", "identity": 0.986, "query_cover": 0.9952 } ] }
organismQuantity	24.0

id	d186dca7-2c4a-472e-a776-0bec1a0b73b4
scientificName	Perophora japonica
AphiaID	103758
eventDate	2022-05-25
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S45
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGCTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGACCTGGCCTTACCTTCGGTTCCCCGCCGGTGCTCTTGACTGAGTGTCGGCGGCGGCCGGAACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Perophora japonica", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103758", "confidence": 0.94 }, { "method": "VSEARCH", "scientificName": "Perophora_japonica", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103758", "accession": "AB499607.1.1752_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_herdmanni", "accession": "FM244847.1.1607_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Perophora_sagamiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250618", "accession": "AB104873.1.1720_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "accession": "EU662244.1.1230_U", "identity": 0.986, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "accession": "EU662235.1.1233_U", "identity": 0.986, "query_cover": 0.9952 } ] }
organismQuantity	19.0

id	f3370b5b-454c-4425-a074-1ee2523bc6a5
scientificName	Perophora japonica
AphiaID	103758
eventDate	2022-05-25
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	S48
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGCTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGACCTGGCCTTACCTTCGGTTCCCCGCCGGTGCTCTTGACTGAGTGTCGGCGGCGGCCGGAACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Perophora japonica", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103758", "confidence": 0.94 }, { "method": "VSEARCH", "scientificName": "Perophora_japonica", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103758", "accession": "AB499607.1.1752_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_herdmanni", "accession": "FM244847.1.1607_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Perophora_sagamiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250618", "accession": "AB104873.1.1720_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "accession": "EU662244.1.1230_U", "identity": 0.986, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "accession": "EU662235.1.1233_U", "identity": 0.986, "query_cover": 0.9952 } ] }
organismQuantity	17.0

id	d8092082-74b5-4e3f-859f-88009e2527f7
scientificName	Perophora japonica
AphiaID	103758
eventDate	2022-05-25
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	S47
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGCTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGACCTGGCCTTACCTTCGGTTCCCCGCCGGTGCTCTTGACTGAGTGTCGGCGGCGGCCGGAACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Perophora japonica", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103758", "confidence": 0.94 }, { "method": "VSEARCH", "scientificName": "Perophora_japonica", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103758", "accession": "AB499607.1.1752_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_herdmanni", "accession": "FM244847.1.1607_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Perophora_sagamiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250618", "accession": "AB104873.1.1720_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "accession": "EU662244.1.1230_U", "identity": 0.986, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "accession": "EU662235.1.1233_U", "identity": 0.986, "query_cover": 0.9952 } ] }
organismQuantity	11.0

id	f4b5a736-b809-4776-98f4-a3a36ad34b1d
scientificName	Perophora japonica
AphiaID	103758
eventDate	2022-05-25
decimalLongitude	178.42325
decimalLatitude	-18.13513
materialSampleID	S65
target_gene	18S
DNA_sequence	AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGCTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGCCGGTCCGTCGCAAGGCGTGCACTGGCCGACCTGGCCTTACCTTCGGTTCCCCGCCGGTGCTCTTGACTGAGTGTCGGCGGCGGCCGGAACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Perophora japonica", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103758", "confidence": 0.94 }, { "method": "VSEARCH", "scientificName": "Perophora_japonica", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103758", "accession": "AB499607.1.1752_U", "identity": 1, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_herdmanni", "accession": "FM244847.1.1607_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Perophora_sagamiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250618", "accession": "AB104873.1.1720_U", "identity": 0.995, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "accession": "EU662244.1.1230_U", "identity": 0.986, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_turbinata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103756", "accession": "EU662235.1.1233_U", "identity": 0.986, "query_cover": 0.9952 } ] }
organismQuantity	8.0

id	f3ea2b21-1cba-4c6b-99df-ae8da36931cc
scientificName	Perophora japonica
AphiaID	103758
eventDate	2022-05-25
decimalLongitude	178.4255
decimalLatitude	-18.13163
materialSampleID	S47
target_gene	18S
DNA_sequence	TGACGCGGTTATTCCAGCTCCAAAAGTGTATATTTAAGTTGCTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGCTGGTCCGTCGCAAGGCGTGCACTGGCCGACCTGGCCTTACCTTCGGTTCCCCGCCGGTGCTCTTGACTGAGTGTCGACGGCGGCCGGAACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Perophora japonica", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103758", "confidence": 0.81 }, { "method": "VSEARCH", "scientificName": "Perophora_japonica", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103758", "accession": "AB499607.1.1752_U", "identity": 0.976, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Ecteinascidia_herdmanni", "accession": "FM244847.1.1607_U", "identity": 0.971, "query_cover": 0.9952 }, { "method": "VSEARCH", "scientificName": "Perophora_sagamiensis", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250618", "accession": "AB104873.1.1720_U", "identity": 0.971, "query_cover": 0.9952 } ] }
organismQuantity	1.0

Perophora japonica in Fiji

Status

Perophora japonica does not have an offial status in Fiji.

Notes

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No notes found.