| Occurrences: |
view occurrences
| id |
a29a92fe-117d-4079-a2c6-a614306ff404
|
| scientificName |
Aidanosagitta neglecta
|
| AphiaID |
266708
|
| eventDate |
2022-02-01
|
| decimalLongitude |
178.42325
|
| decimalLatitude |
-18.13513
|
| materialSampleID |
S97
|
| target_gene |
COI
|
| DNA_sequence |
TTTGTCCACTCTCGGGCATCCTGGGGCTGCTGTAGATCTAGGGATTTTCTCTCTTCACCTGGCAGGGGTTAGAAGGATCCTGGGGTCGGCGAACTTTATTACTACAATCTCCAACATGCGACCTGAAGCTCTAACTATGGAACTTATACCACTATTCGTATGATCTGTACTTTTAACCGCGATTCTACTTCTCTTGTCCTTACCGGTGCTGGCTGGGGCCATTACTATGCTATTGACCGACCGTAATTTTAATACATCTTTCTTCGACCCCGCGGGGGGAGGTGACCCAATTTTGTACCAACATCTTTTT
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Aidanosagitta neglecta",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:266708",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Aidanosagitta neglecta",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:266708",
"accession": "KY882130",
"identity": 0.994,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Aidanosagitta neglecta",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:266708",
"accession": "JN258021",
"identity": 0.982,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Aidanosagitta neglecta",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:266708",
"accession": "JN258022",
"identity": 0.982,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Aidanosagitta neglecta",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:266708",
"accession": "JN258023",
"identity": 0.982,
"query_cover": 0.9968
}
]
}
|
| organismQuantity |
4.0
|
| id |
756e634f-4484-479b-9fcc-f7688384ed3e
|
| scientificName |
Aidanosagitta neglecta
|
| AphiaID |
266708
|
| eventDate |
2022-02-01
|
| decimalLongitude |
178.4255
|
| decimalLatitude |
-18.13163
|
| materialSampleID |
S100
|
| target_gene |
COI
|
| DNA_sequence |
TTTGTCCACTCTCGGGCATCCTGGGGCTGCTGTAGATCTAGGGATTTTCTCTCTTCACCTGGCAGGGGTTAGAAGGATCCTGGGGTCGGCGAACTTTATTACTACAATCTCCAACATGCGACCTGAAGCTCTAACTATGGAACTTATACCACTATTCGTATGATCTGTACTTTTAACCGCGATTCTACTTCTCTTGTCCTTACCGGTGCTGGCTGGGGCCATTACTATGCTATTGACCGACCGTAATTTTAATACATCTTTCTTCGACCCCGCGGGGGGAGGTGACCCAATTTTGTACCAACATCTTTTT
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Aidanosagitta neglecta",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:266708",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Aidanosagitta neglecta",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:266708",
"accession": "KY882130",
"identity": 0.994,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Aidanosagitta neglecta",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:266708",
"accession": "JN258021",
"identity": 0.982,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Aidanosagitta neglecta",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:266708",
"accession": "JN258022",
"identity": 0.982,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Aidanosagitta neglecta",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:266708",
"accession": "JN258023",
"identity": 0.982,
"query_cover": 0.9968
}
]
}
|
| organismQuantity |
2.0
|
|