PacMAN decision support system

Potential detection of Diplosoma simile in Fiji

Description:

Potential detection of Diplosoma simile with confidence low on 2023-08-15 in material sample USP-24-01-55, marker 18S

Confidence:

low

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Diplosoma simile
Chordata > Ascidiacea > Aplousobranchia > Didemnidae
WoRMS: 250415

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

1.0

Reads:

318.0

Names:

5

Occurrences:

view occurrences

id	f511b41d-ccf6-4533-990b-136ff6296a18
scientificName	Diplosoma
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-55
target_gene	18S
DNA_sequence	GGCCCCGAGATTTATTGCGCGGCAATGATTGAGAGGGACGGACGGGGGCATTCGTACTGCGCCGGGAGAGGTGAAATTCGCGGATCGGCGCAAGACGAACCGAAGCGAAGGCGTCTGCCAAGGACGTTTTCCTTGATCAAGAGCGAGAGTCGGAGGCTCC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Diplosoma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103457", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211103.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211106.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211107.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_ooru", "scientificNameID": "urn:lsid:marinespecies.org:taxname:266061", "accession": "AB211098.1.2081_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211108.1.2075_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	318.0

id	8c910783-1267-4fdb-a333-89f0388851ad
scientificName	Diplosoma
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-54
target_gene	18S
DNA_sequence	GGCCCCGAGATTTATTGCGCGGCAATGATTGAGAGGGACGGACGGGGGCATTCGTACTGCGCCGGGAGAGGTGAAATTCGCGGATCGGCGCAAGACGAACCGAAGCGAAGGCGTCTGCCAAGGACGTTTTCCTTGATCAAGAGCGAGAGTCGGAGGCTCC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Diplosoma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103457", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211103.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211106.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211107.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_ooru", "scientificNameID": "urn:lsid:marinespecies.org:taxname:266061", "accession": "AB211098.1.2081_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211108.1.2075_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	41.0

id	93916718-0384-4b32-9b5c-0e6bc146fae5
scientificName	Diplosoma
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-59
target_gene	18S
DNA_sequence	GGCCCCGAGATTTATTGCGCGGCAATGATTGAGAGGGACGGACGGGGGCATTCGTACTGCGCCGGGAGAGGTGAAATTCGCGGATCGGCGCAAGACGAACCGAAGCGAAGGCGTCTGCCAAGGACGTTTTCCTTGATCAAGAGCGAGAGTCGGAGGCTCC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Diplosoma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103457", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211103.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211106.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211107.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_ooru", "scientificNameID": "urn:lsid:marinespecies.org:taxname:266061", "accession": "AB211098.1.2081_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211108.1.2075_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	39.0

id	ab4ca340-8649-493d-9bdb-1263d64d10b3
scientificName	Diplosoma
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-57
target_gene	18S
DNA_sequence	GGCCCCGAGATTTATTGCGCGGCAATGATTGAGAGGGACGGACGGGGGCATTCGTACTGCGCCGGGAGAGGTGAAATTCGCGGATCGGCGCAAGACGAACCGAAGCGAAGGCGTCTGCCAAGGACGTTTTCCTTGATCAAGAGCGAGAGTCGGAGGCTCC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Diplosoma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103457", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211103.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211106.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211107.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_ooru", "scientificNameID": "urn:lsid:marinespecies.org:taxname:266061", "accession": "AB211098.1.2081_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211108.1.2075_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	27.0

id	c27986b4-cc33-4df4-a1b3-7f42d461a5fc
scientificName	Diplosoma
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-48
target_gene	18S
DNA_sequence	GGCCCCGAGATTTATTGCGCGGCAATGATTGAGAGGGACGGACGGGGGCATTCGTACTGCGCCGGGAGAGGTGAAATTCGCGGATCGGCGCAAGACGAACCGAAGCGAAGGCGTCTGCCAAGGACGTTTTCCTTGATCAAGAGCGAGAGTCGGAGGCTCC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Diplosoma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103457", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211103.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211106.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211107.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_ooru", "scientificNameID": "urn:lsid:marinespecies.org:taxname:266061", "accession": "AB211098.1.2081_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211108.1.2075_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	10.0

id	80b6f2b9-7726-4a7d-b064-139dbc252966
scientificName	Diplosoma
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-38
target_gene	18S
DNA_sequence	GGCCCCGAGATTTATTGCGCGGCAATGATTGAGAGGGACGGACGGGGGCATTCGTACTGCGCCGGGAGAGGTGAAATTCGCGGATCGGCGCAAGACGAACCGAAGCGAAGGCGTCTGCCAAGGACGTTTTCCTTGATCAAGAGCGAGAGTCGGAGGCTCC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Diplosoma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103457", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211103.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211106.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211107.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_ooru", "scientificNameID": "urn:lsid:marinespecies.org:taxname:266061", "accession": "AB211098.1.2081_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211108.1.2075_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	2.0

id	f421618f-710e-41a5-be34-4c79849bc4da
scientificName	Diplosoma
eventDate	2023-08-15
decimalLongitude	178.425933
decimalLatitude	-18.1293
materialSampleID	USP-24-01-49
target_gene	18S
DNA_sequence	GGCCCCGAGATTTATTGCGCGGCAATGATTGAGAGGGACGGACGGGGGCATTCGTACTGCGCCGGGAGAGGTGAAATTCGCGGATCGGCGCAAGACGAACCGAAGCGAAGGCGTCTGCCAAGGACGTTTTCCTTGATCAAGAGCGAGAGTCGGAGGCTCC
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Diplosoma", "scientificNameID": "urn:lsid:marinespecies.org:taxname:103457", "confidence": 1 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211103.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simile", "scientificNameID": "urn:lsid:marinespecies.org:taxname:250415", "accession": "AB211106.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211107.1.2075_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_ooru", "scientificNameID": "urn:lsid:marinespecies.org:taxname:266061", "accession": "AB211098.1.2081_U", "identity": 1, "query_cover": 0.9938 }, { "method": "VSEARCH", "scientificName": "Diplosoma_simileguwa", "scientificNameID": "urn:lsid:marinespecies.org:taxname:389764", "accession": "AB211108.1.2075_U", "identity": 1, "query_cover": 0.9938 } ] }
organismQuantity	1.0

Diplosoma simile in Fiji

Status

Diplosoma simile does not have an offial status in Fiji.

Notes

No notes found.