| Occurrences: |
view occurrences
| id |
d306c477-edc6-4a17-8044-0b223091ede0
|
| scientificName |
Ascidia sydneiensis var. samea
|
| AphiaID |
215940
|
| eventDate |
2021-12-07
|
| decimalLongitude |
178.425933
|
| decimalLatitude |
-18.1293
|
| materialSampleID |
S30
|
| target_gene |
18S
|
| DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGTCGGTCCGTCGCAAGGCGTGCACTGACCGTCCTGGCCTCACCCCCGGTTCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Ascidia sydneiensis samea",
"confidence": 0.89
},
{
"method": "VSEARCH",
"scientificName": "Ascidia_sydneiensis_samea",
"accession": "AF165819.1.1065_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Ascidiella_sp.",
"accession": "FM244843.1.1766_U",
"identity": 0.976,
"query_cover": 0.9952
}
]
}
|
| organismQuantity |
30.0
|
| id |
81d3129a-1bcd-41bd-8f87-6aed231eb474
|
| scientificName |
Ascidia sydneiensis var. samea
|
| AphiaID |
215940
|
| eventDate |
2021-12-07
|
| decimalLongitude |
178.4255
|
| decimalLatitude |
-18.13163
|
| materialSampleID |
S55
|
| target_gene |
18S
|
| DNA_sequence |
AGCCGCGGTAATTCCAGCTCCAAAAGTGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATTTTGGGCGCAGGCGGTCGGTCCGTCGCAAGGCGTGCACTGACCGTCCTGGCCTCACCCCCGGTTCTCCGCCGGTGCCCTTGACTGAGTGTCGGCGGCGGCCGGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Ascidia sydneiensis samea",
"confidence": 0.89
},
{
"method": "VSEARCH",
"scientificName": "Ascidia_sydneiensis_samea",
"accession": "AF165819.1.1065_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Ascidiella_sp.",
"accession": "FM244843.1.1766_U",
"identity": 0.976,
"query_cover": 0.9952
}
]
}
|
| organismQuantity |
1.0
|
|