PacMAN decision support system

Potential detection of Saccostrea cuccullata in Fiji

Description:

Potential detection of Saccostrea cuccullata with confidence low on 2023-11-28 in material sample USP-24-01-165, marker COI

Confidence:

low

Risk:

low view risk analysis

Status:

unreviewed

Area:

Fiji

Taxon:

Saccostrea cuccullata
Mollusca > Bivalvia > Ostreida > Ostreidae
WoRMS: 181316

Created:

Nov. 5, 2024

Created by:

pacmandetections (UNESCO)

Top hit:

Reads:

6.0

Names:

Occurrences:

view occurrences

id	87199472-2ad4-45ae-8274-f355107210da
scientificName	Saccostrea cuccullata
AphiaID	181316
eventDate	2023-11-28
decimalLongitude	178.425933
decimalLatitude	-18.1293
eventID	SUVA3_20231128_WC
materialSampleID	USP-24-01-165
target_gene	COI
DNA_sequence	GTTATCTACTTTCTCTTACCATGGTATGTGTATAGATTTAGCCATTTTGAGACTTCACTTGGCTGGTATTAGCTCAATTTTTAGTTCAATTAACTTTATGGTGACTATTAAAAATATGCGTTCTGTGGACGGGCACCTATTAAGTCTATTTCCGTGATCAATTAAAGTAACTTCTTTTTTACTACTTACGACCCTTCCTGTATTAGCCGGGGGTCTTACTATGCTTCTGACAGATCGACACTTTAACACCTCATTTTTCGACCCTGTGGGTGGCGGAGATCCGGTTTTATTCCAGCACTTGTTT
identificationRemarks	{ "pipeline": "PacMAN pipeline", "parameters": { "rdp_confidence_threshold": 0.8, "vsearch_identity_threshold": 0.97, "vsearch_cover_threshold": 0.97, "basta_identity_threshold": 99 }, "annotations": [ { "method": "RDP classifier", "scientificName": "Saccostrea cucullata", "scientificNameID": "urn:lsid:marinespecies.org:taxname:224654", "confidence": 1 } ] }
organismQuantity	6.0

Saccostrea cuccullata does not have an offial status in Fiji.

No notes found.