| Occurrences: |
view occurrences
| id |
9beee25a-e38d-42c0-9655-5dce6d547cdf
|
| scientificName |
Paracaprella pusilla
|
| AphiaID |
211364
|
| eventDate |
2023-04-27
|
| decimalLongitude |
178.4255
|
| decimalLatitude |
-18.13163
|
| eventID |
SUVA1_20230427_S3B
|
| materialSampleID |
USP-24-01-101
|
| target_gene |
COI
|
| DNA_sequence |
TTTAAGGTCTAGATTAGGCCACCCTGGTGCAGCTGTAGATATAGCAATTTTTTCACTCCATCTAGCTGGGGCTAGATCTATCCTTGGGGCTATTAATTTTATTTCAACAATTATTAATATGCGACCTGAAGGTATAACTATAGACCGCATACCTTTATTTGTTTGATCTGTTTTTATCACAGCTATCCTTCTGTTACTCTCTCTACCTGTTTTAGCCGGAGCTATTACAATACTTCTAACAGACCGAAATTTAAATACTTCATTTTTTGACCCTTTAGGGGGAGGTGACCCTATCTTGTACCAGCATTTATTT
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Paracaprella pusilla",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:211364",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Paracaprella pusilla",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:211364",
"accession": "KF743488",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Paracaprella pusilla",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:211364",
"accession": "KF743491",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Paracaprella pusilla",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:211364",
"accession": "MK764081",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Paracaprella pusilla",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:211364",
"accession": "MK764082",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Paracaprella pusilla",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:211364",
"accession": "MK764086",
"identity": 1,
"query_cover": 0.9968
}
]
}
|
| organismQuantity |
58.0
|
| id |
89764c69-03ed-4032-95f9-3fda9bead853
|
| scientificName |
Paracaprella pusilla
|
| AphiaID |
211364
|
| eventDate |
2023-04-27
|
| decimalLongitude |
178.42325
|
| decimalLatitude |
-18.13513
|
| eventID |
SUVA2_20230427_S1A
|
| materialSampleID |
USP-24-01-103
|
| target_gene |
COI
|
| DNA_sequence |
TTTAAGGTCTAGATTAGGCCACCCTGGTGCAGCTGTAGATATAGCAATTTTTTCACTCCATCTAGCTGGGGCTAGATCTATCCTTGGGGCTATTAATTTTATTTCAACAATTATTAATATGCGACCTGAAGGTATAACTATAGACCGCATACCTTTATTTGTTTGATCTGTTTTTATCACAGCTATCCTTCTGTTACTCTCTCTACCTGTTTTAGCCGGAGCTATTACAATACTTCTAACAGACCGAAATTTAAATACTTCATTTTTTGACCCTTTAGGGGGAGGTGACCCTATCTTGTACCAGCATTTATTT
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Paracaprella pusilla",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:211364",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Paracaprella pusilla",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:211364",
"accession": "KF743488",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Paracaprella pusilla",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:211364",
"accession": "KF743491",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Paracaprella pusilla",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:211364",
"accession": "MK764081",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Paracaprella pusilla",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:211364",
"accession": "MK764082",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Paracaprella pusilla",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:211364",
"accession": "MK764086",
"identity": 1,
"query_cover": 0.9968
}
]
}
|
| organismQuantity |
23.0
|
|