| Occurrences: |
view occurrences
| id |
89e1a51c-da48-4875-8d9d-a152eca3c3c1
|
| scientificName |
Saccostrea cuccullata
|
| AphiaID |
181316
|
| eventDate |
2022-05-25
|
| decimalLongitude |
178.4255
|
| decimalLatitude |
-18.13163
|
| materialSampleID |
S152
|
| target_gene |
COI
|
| DNA_sequence |
ATTATCTACTTTTTCGTATCATGGGATGTGTATGGATCTGGCTATTTTGAGACTTCATTTAGCCGGTATTAGGTCAATTTTTAGTTCGATTAATTTTATAGTGACTATTAAAAATATGCGTTCTGTAGATGGCCACTTGTTAAGGCTATTTCCGTGATCAATTAAGGTAACTTCTTTTTTGCTGCTGACAACTTTGCCTGTATTAGCCGGAGGTCTTACTATGCTTTTAACAGACCGACACTTTAACACCTCATTTTTCGACCCTGTAGGTGGGGGGGATCCAATTTTATTCCAGCATTTGTTT
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Saccostrea cucullata",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:224654",
"confidence": 0.87
}
]
}
|
| organismQuantity |
15.0
|
| id |
b5e5a8df-94fa-41fb-9170-ce4f5cc081cb
|
| scientificName |
Saccostrea cuccullata
|
| AphiaID |
181316
|
| eventDate |
2022-05-25
|
| decimalLongitude |
178.42325
|
| decimalLatitude |
-18.13513
|
| materialSampleID |
S153
|
| target_gene |
COI
|
| DNA_sequence |
ATTATCTACTTTTTCGTATCATGGGATGTGTATGGATCTGGCTATTTTGAGACTTCATTTAGCCGGTATTAGGTCAATTTTTAGTTCGATTAATTTTATAGTGACTATTAAAAATATGCGTTCTGTAGATGGCCACTTGTTAAGGCTATTTCCGTGATCAATTAAGGTAACTTCTTTTTTGCTGCTGACAACTTTGCCTGTATTAGCCGGAGGTCTTACTATGCTTTTAACAGACCGACACTTTAACACCTCATTTTTCGACCCTGTAGGTGGGGGGGATCCAATTTTATTCCAGCATTTGTTT
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Saccostrea cucullata",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:224654",
"confidence": 0.87
}
]
}
|
| organismQuantity |
3.0
|
| id |
c5a85906-fc5e-4213-88cc-cd541e9ff020
|
| scientificName |
Saccostrea cuccullata
|
| AphiaID |
181316
|
| eventDate |
2022-05-25
|
| decimalLongitude |
178.4255
|
| decimalLatitude |
-18.13163
|
| materialSampleID |
S137
|
| target_gene |
COI
|
| DNA_sequence |
ATTATCTACTTTTTCGTATCATGGGATGTGTATGGATCTGGCTATTTTGAGACTTCATTTAGCCGGTATTAGGTCAATTTTTAGTTCGATTAATTTTATAGTGACTATTAAAAATATGCGTTCTGTAGATGGCCACTTGTTAAGGCTATTTCCGTGATCAATTAAGGTAACTTCTTTTTTGCTGCTGACAACTTTGCCTGTATTAGCCGGAGGTCTTACTATGCTTTTAACAGACCGACACTTTAACACCTCATTTTTCGACCCTGTAGGTGGGGGGGATCCAATTTTATTCCAGCATTTGTTT
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Saccostrea cucullata",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:224654",
"confidence": 0.87
}
]
}
|
| organismQuantity |
2.0
|
|