| Occurrences: |
view occurrences
| id |
a73cfba2-a675-4800-9c8e-5079ada8140e
|
| scientificName |
Macrorhynchia philippina
|
| AphiaID |
117305
|
| eventDate |
2023-11-28
|
| decimalLongitude |
178.425933
|
| decimalLatitude |
-18.1293
|
| eventID |
SUVA3_20231128_PB
|
| materialSampleID |
USP-24-01-185
|
| target_gene |
COI
|
| DNA_sequence |
TTTATCAGGTCCAATAGCTCACTCTGGAAGTTCAGTTGATTTAGCTATATTTAGTCTTCATTGTGCAGGTGCTTCTTCTATTATGGGTGCCATTAATTTCATTATAACCATATTTAATATGAGAACTCCAAGTATGACAATGGATAAAATTCCTTTATTTGTATGATCTGTTTTAATTACAGCCTTCCTATTATTATTATCTTTACCAGTATTAGCAGGAGCTATAACTATGTTATTAACTGACCGTAATTTTAATACTACTTTTTTTGACCCAACAGGAGGTGGAGATCCTATCCTATACCAACATTTATTT
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Macrorhynchia philippina",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117305",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Macrorhynchia philippina",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117305",
"accession": "MH282740",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Macrorhynchia philippina",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117305",
"accession": "MH282730",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Macrorhynchia philippina",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117305",
"accession": "MH282727",
"identity": 0.993,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Macrorhynchia philippina",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117305",
"accession": "MH282732",
"identity": 0.993,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Macrorhynchia philippina",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117305",
"accession": "MH282733",
"identity": 0.993,
"query_cover": 0.9968
}
]
}
|
| organismQuantity |
48.0
|
| id |
8cd6635b-1a80-416e-8ecc-483a2ff58718
|
| scientificName |
Macrorhynchia philippina
|
| AphiaID |
117305
|
| eventDate |
2023-11-28
|
| decimalLongitude |
178.425933
|
| decimalLatitude |
-18.1293
|
| eventID |
SUVA3_20231128_WA
|
| materialSampleID |
USP-24-01-163
|
| target_gene |
COI
|
| DNA_sequence |
TTTATCAGGTCCAATAGCTCACTCTGGAAGTTCAGTTGATTTAGCTATATTTAGTCTTCATTGTGCAGGTGCTTCTTCTATTATGGGTGCCATTAATTTCATTATAACCATATTTAATATGAGAACTCCAAGTATGACAATGGATAAAATTCCTTTATTTGTATGATCTGTTTTAATTACAGCCTTCCTATTATTATTATCTTTACCAGTATTAGCAGGAGCTATAACTATGTTATTAACTGACCGTAATTTTAATACTACTTTTTTTGACCCAACAGGAGGTGGAGATCCTATCCTATACCAACATTTATTT
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Macrorhynchia philippina",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117305",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Macrorhynchia philippina",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117305",
"accession": "MH282740",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Macrorhynchia philippina",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117305",
"accession": "MH282730",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Macrorhynchia philippina",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117305",
"accession": "MH282727",
"identity": 0.993,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Macrorhynchia philippina",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117305",
"accession": "MH282732",
"identity": 0.993,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Macrorhynchia philippina",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117305",
"accession": "MH282733",
"identity": 0.993,
"query_cover": 0.9968
}
]
}
|
| organismQuantity |
5.0
|
| id |
bf49401a-e2fb-44fc-9b73-08dda7349847
|
| scientificName |
Macrorhynchia philippina
|
| AphiaID |
117305
|
| eventDate |
2023-11-28
|
| decimalLongitude |
178.425933
|
| decimalLatitude |
-18.1293
|
| eventID |
SUVA3_20231128_S2B
|
| materialSampleID |
USP-24-01-170
|
| target_gene |
COI
|
| DNA_sequence |
TTTATCAGGTCCAATAGCTCACTCTGGAAGTTCAGTTGATTTAGCTATATTTAGTCTTCATTGTGCAGGTGCTTCTTCTATTATGGGTGCCATTAATTTCATTATAACCATATTTAATATGAGAACTCCAAGTATGACAATGGATAAAATTCCTTTATTTGTATGATCTGTTTTAATTACAGCCTTCCTATTATTATTATCTTTACCAGTATTAGCAGGAGCTATAACTATGTTATTAACTGACCGTAATTTTAATACTACTTTTTTTGACCCAACAGGAGGTGGAGATCCTATCCTATACCAACATTTATTT
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Macrorhynchia philippina",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117305",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Macrorhynchia philippina",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117305",
"accession": "MH282740",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Macrorhynchia philippina",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117305",
"accession": "MH282730",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Macrorhynchia philippina",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117305",
"accession": "MH282727",
"identity": 0.993,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Macrorhynchia philippina",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117305",
"accession": "MH282732",
"identity": 0.993,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Macrorhynchia philippina",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117305",
"accession": "MH282733",
"identity": 0.993,
"query_cover": 0.9968
}
]
}
|
| organismQuantity |
1.0
|
|