| Occurrences: |
view occurrences
| id |
907e62a2-0594-4d35-8eb0-5b5f719b38d1
|
| scientificName |
Amphibalanus reticulatus
|
| AphiaID |
421140
|
| eventDate |
2023-08-24
|
| decimalLongitude |
178.4255
|
| decimalLatitude |
-18.13163
|
| eventID |
SUVA1_20230824_WB
|
| materialSampleID |
USP-24-01-126
|
| target_gene |
COI
|
| DNA_sequence |
TTTATCAAGTAACATTGCTCATTCTGGAGCTTCTGTAGATTTATCAATTTTCTCACTTCATTTAGCTGGGGCTTCTTCAATTTTAGGAGCAATCAATTTTATATCTACAGTTATTAATATACGAGCAGAAACACTTACATTTGATCGACTTCCTTTATTTGTTTGAAGTGTTTTTATTACAGTAATTTTATTATTACTTTCCTTACCAGTTTTAGCCGGAGCTATTACTATATTATTAACTGATCGAAATCTAAATACATCATTTTTTGATCCTACTGGAGGAGGAGACCCAATTTTATACCAACACCTATTT
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Amphibalanus reticulatus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421140",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus reticulatus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421140",
"accession": "KU204276",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus reticulatus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421140",
"accession": "MW196413",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus reticulatus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421140",
"accession": "KU204297",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus reticulatus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421140",
"accession": "KU204256",
"identity": 0.994,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Amphibalanus reticulatus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421140",
"accession": "MW196412",
"identity": 0.994,
"query_cover": 0.9968
}
]
}
|
| organismQuantity |
4.0
|
| id |
da83e8f6-521a-43fe-bcd0-8afd84e2abcc
|
| scientificName |
Amphibalanus reticulatus
|
| AphiaID |
421140
|
| eventDate |
2023-08-24
|
| decimalLongitude |
178.4255
|
| decimalLatitude |
-18.13163
|
| eventID |
SUVA1_20230824_S3C
|
| materialSampleID |
USP-24-01-160
|
| target_gene |
COI
|
| DNA_sequence |
TTTATCAAGTAACATTGCTCATTCTGGAGCTTCAGTAGATTTATCAATTTTCTCTCTTCATTTAGCTGGAGCTTCTTCAATTTTAGGGGCAATTAATTTTATATCTACAGTTATTAATATACGAGCAGAAACACTTACATTTGACCGACTTCCATTATTTGTTTGAAGTGTTTTTATTACAGTAATTTTATTATTACTTTCCTTACCAGTTCTAGCCGGAGCTATTACTATATTATTAACTGACCGAAATCTAAATACATCATTTTTTGACCCTACTGGAGGAGGAGATCCAATTTTATATCAACACCTATTT
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Amphibalanus reticulatus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421140",
"confidence": 1
}
]
}
|
| organismQuantity |
93.0
|
| id |
e174cfa3-74ec-4bb3-a76a-117d8dbee0d3
|
| scientificName |
Amphibalanus reticulatus
|
| AphiaID |
421140
|
| eventDate |
2023-08-24
|
| decimalLongitude |
178.4255
|
| decimalLatitude |
-18.13163
|
| eventID |
SUVA1_20230824_S3C
|
| materialSampleID |
USP-24-01-160
|
| target_gene |
COI
|
| DNA_sequence |
TTTATCAAGTAACATTGCTCATTCTGGAGCTTCAGTAGATTTATCAATTTTCTCTCTTCATTTAGCTGGAGCTTCTTCAATTTTAGGGGCAATTAATTTTATATCTACAGTTATTAATATACGAGCAGAAACACTTACATTTGACCGACTTCCATTATTTGTTTGAAGTGTTTTTATTACAGTAATTTTATTATTACTTTCCTTACCAGTTCTAGCCGGAGCTATTACTATATTGTTAATTGACCGAAATCTAAATACATCATTTTTTGACCCTACTGGAGGAGGAGATCCAATTTTATATCAACACCTATTT
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Amphibalanus reticulatus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421140",
"confidence": 0.98
}
]
}
|
| organismQuantity |
47.0
|
| id |
ffdfc0f8-462e-4a06-a20d-d6ef23870f49
|
| scientificName |
Amphibalanus reticulatus
|
| AphiaID |
421140
|
| eventDate |
2023-08-24
|
| decimalLongitude |
178.4255
|
| decimalLatitude |
-18.13163
|
| eventID |
SUVA1_20230824_S3C
|
| materialSampleID |
USP-24-01-160
|
| target_gene |
COI
|
| DNA_sequence |
TTTATCAAGTAACATTGCTCATTCTGGAGCTTCAGTAGATTTATCAATTTTCTCTCTTCATTTAGCTGGAGCTTCTTCAATTTTAGGGGCAATTAATTTTATATCTACAGTTATTAATATACGAGCAGAAACACTTACATTTGACCGACTTCCATTATTTGTTTGAAGTGTTTTTATTACAGTAATTTTATTATTACTTTCCTTACCAGTTCTAGCAGGAGCTATTACTATATTATTAACTGACCGAAATCTAAATACATCATTTTTTGACCCTACTGGAGGAGGAGATCCAATTTTATATCAACACCTATTT
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Amphibalanus reticulatus",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:421140",
"confidence": 0.98
}
]
}
|
| organismQuantity |
2.0
|
|