Occurrences: |
view occurrences
id |
9c7d014f-2509-473d-9923-dcdb3e437c01
|
scientificName |
Aidanosagitta neglecta
|
AphiaID |
266708
|
eventDate |
2023-04-27
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
eventID |
SUVA2_20230427_PC
|
materialSampleID |
USP-24-01-116
|
target_gene |
COI
|
DNA_sequence |
TTTGTCCACTCTCGGGCATCCTGGGGCTGCTGTAGATCTAGGGATTTTCTCTCTTCACCTGGCAGGGGTTAGAAGGATCCTGGGGTCGGCGAACTTTATTACTACAATCTCCAACATGCGACCTGAAGCTCTAACCATGGAACTTATACCACTATTCGTATGATCTGTACTTTTAACCGCGATTCTACTTCTCTTGTCCT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Aidanosagitta neglecta",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:266708",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Aidanosagitta neglecta",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:266708",
"accession": "JN258021",
"identity": 0.995,
"query_cover": 0.995
},
{
"method": "VSEARCH",
"scientificName": "Aidanosagitta neglecta",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:266708",
"accession": "JN258022",
"identity": 0.995,
"query_cover": 0.995
},
{
"method": "VSEARCH",
"scientificName": "Aidanosagitta neglecta",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:266708",
"accession": "JN258023",
"identity": 0.995,
"query_cover": 0.995
},
{
"method": "VSEARCH",
"scientificName": "Aidanosagitta neglecta",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:266708",
"accession": "KY882130",
"identity": 0.99,
"query_cover": 0.995
}
]
}
|
organismQuantity |
1.0
|
id |
acb22dec-4f49-4229-b9c0-ffba248e1e2d
|
scientificName |
Aidanosagitta neglecta
|
AphiaID |
266708
|
eventDate |
2023-04-27
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
eventID |
SUVA2_20230427_PC
|
materialSampleID |
USP-24-01-116
|
target_gene |
COI
|
DNA_sequence |
TTTGTCCACTCTCGGGCATCCTGGGGCTGCTGTAGATCTAGGGATTTTCTCTCTTCACCTGGCAGGGGTTAGAAGGATCCTGGGGTCGGCGAACTTTATTACTACAATCTCCAACATGCGACCTGAAGCTCTAACTATGGAACTTATACCACTATTCGTATGATCTGTACTTTTAACCGCGATTCTACTTCTCTTGTCCTTACCGGTGCTGGCTGGGGCCATTACTATGCTATTGACCGACCGTAATTTTAATACATCTTTCTTCGACCCAGCGGGGGGAGGTGACCCAATTTTGTACCAACATCTTTTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Aidanosagitta neglecta",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:266708",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Aidanosagitta neglecta",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:266708",
"accession": "KY882130",
"identity": 0.99,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Aidanosagitta neglecta",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:266708",
"accession": "JN258021",
"identity": 0.982,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Aidanosagitta neglecta",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:266708",
"accession": "JN258022",
"identity": 0.982,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Aidanosagitta neglecta",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:266708",
"accession": "JN258023",
"identity": 0.982,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
9.0
|
id |
ec3324b4-6169-4d02-8548-70494bfda5cd
|
scientificName |
Aidanosagitta neglecta
|
AphiaID |
266708
|
eventDate |
2023-04-27
|
decimalLongitude |
178.42325
|
decimalLatitude |
-18.13513
|
eventID |
SUVA2_20230427_PB
|
materialSampleID |
USP-24-01-115
|
target_gene |
COI
|
DNA_sequence |
TTTGTCCACTCTCGGGCATCCTGGGGCTGCTGTAGATCTAGGGATTTTCTCTCTTCACCTGGCAGGGGTTAGAAGGATCCTGGGGTCGGCGAACTTTATTACTACAATCTCCAACATGCGACCTGAAGCTCTAACTATGGAACTTATACCACTATTCGTATGATCTGTACTTTTAACCGCGATTCTACTTCTCTTGTCCTTACCGGTGCTGGCTGGGGCCATTACTATGCTATTGACCGACCGTAATTTTAATACATCTTTCTTCGACCCAGCGGGGGGAGGTGACCCAATTTTGTACCAACATCTTTTT
|
identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Aidanosagitta neglecta",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:266708",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Aidanosagitta neglecta",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:266708",
"accession": "KY882130",
"identity": 0.99,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Aidanosagitta neglecta",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:266708",
"accession": "JN258021",
"identity": 0.982,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Aidanosagitta neglecta",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:266708",
"accession": "JN258022",
"identity": 0.982,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Aidanosagitta neglecta",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:266708",
"accession": "JN258023",
"identity": 0.982,
"query_cover": 0.9968
}
]
}
|
organismQuantity |
8.0
|
|