identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Sertularella",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117233",
"confidence": 0.91
},
{
"method": "VSEARCH",
"scientificName": "Sertularella_gayi",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117902",
"accession": "FJ550579.1.1703_U",
"identity": 1,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Sertularella_mediterranea",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117903",
"accession": "FJ550546.1.1685_U",
"identity": 1,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Sertularella_sanmatiasensis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:285556",
"accession": "MH392744.1.644_U",
"identity": 0.994,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Gymnangium_hians",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:220593",
"accession": "Z86122.1.1808_U",
"identity": 0.981,
"query_cover": 0.9938
},
{
"method": "VSEARCH",
"scientificName": "Antennella_secundaria",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:117628",
"accession": "FJ550575.1.1716_U",
"identity": 0.981,
"query_cover": 0.9938
}
]
}
|