identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Rhizosolenia similoides",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:160531",
"confidence": 0.96
},
{
"method": "VSEARCH",
"scientificName": "Rhizosolenia setigera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:149115",
"accession": "AB430589.1.1773_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Rhizosolenia pungens",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:149117",
"accession": "JQ315683.1.1260_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Rhizosolenia setigera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:149115",
"accession": "JQ315685.1.1265_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Rhizosolenia imbricata",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:149116",
"accession": "AJ535178.1.1801_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Rhizosolenia setigera",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:149115",
"accession": "AY485508.1.1721_U",
"identity": 1,
"query_cover": 0.9952
}
]
}
|