identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Pseudo-nitzschia seriata",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:149152",
"confidence": 0.91
},
{
"method": "VSEARCH",
"scientificName": "Pseudo-nitzschia turgidula",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:246609",
"accession": "FJ222752.1.1219_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Bacillariophyceae_XXX_sp.",
"accession": "KC771191.1.1787_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Bacillariophyceae_XXX_sp.",
"accession": "KC771189.1.1788_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Pseudo-nitzschia seriata",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:149152",
"accession": "JF698747.1.1613_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Pseudo-nitzschia seriata",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:149152",
"accession": "HM581774.1.1772_U",
"identity": 1,
"query_cover": 0.9952
}
]
}
|