| Occurrences: |
view occurrences
| id |
ab59bbd4-bf7d-4c44-b071-86978fccb801
|
| scientificName |
Halisarca dujardinii
|
| AphiaID |
132736
|
| eventDate |
2023-04-27
|
| decimalLongitude |
178.4255
|
| decimalLatitude |
-18.13163
|
| eventID |
SUVA1_20230427_S2C
|
| materialSampleID |
USP-24-01-99
|
| target_gene |
COI
|
| DNA_sequence |
TTTGGCGGGGATACAGACACATTCCGGGGGGTCTGTGGATATGGCCATATTTAGCTTACACTTGGCCGGTATATCTTCGATTTTAAGCTCCATGAATTTTATAACAACGATTATCAATATGAGGGCGCCTGGTATGACTATGGATCGGCTTCCATTATTTGTATGGTCAATTTTAATCACAACAATCTTATTACTATTGTCTTTGCCGGTTTTAGCTGGTGCGATTACAATGCTTTTAACTGATCGGAATTTTAATACGACTTTTTTTGACCCGGCTGGGGGTGGTGATCCGATTTTATATCAGCATCTTTTT
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Halisarca dujardinii",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:132736",
"confidence": 0.93
},
{
"method": "VSEARCH",
"scientificName": "Halisarca desqueyrouxae",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:932306",
"accession": "KY564211",
"identity": 0.981,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Halisarca dujardinii",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:132736",
"accession": "MG421851",
"identity": 0.978,
"query_cover": 0.9968
}
]
}
|
| organismQuantity |
45.0
|
| id |
b191f61e-51dd-4eaa-bd28-36a509c75279
|
| scientificName |
Halisarca dujardinii
|
| AphiaID |
132736
|
| eventDate |
2023-04-27
|
| decimalLongitude |
178.4255
|
| decimalLatitude |
-18.13163
|
| eventID |
SUVA1_20230427_S3C
|
| materialSampleID |
USP-24-01-102
|
| target_gene |
COI
|
| DNA_sequence |
TTTGGCGGGGATACAGACACATTCCGGGGGGTCTGTGGATATGGCCATATTTAGCTTACACTTGGCCGGTATATCTTCGATTTTAAGCTCCATGAATTTTATAACAACGATTATCAATATGAGGGCGCCTGGTATGACTATGGATCGGCTTCCATTATTTGTATGGTCAATTTTAATCACAACAATCTTATTACTATTGTCTTTGCCGGTTTTAGCTGGTGCGATTACAATGCTTTTAACTGATCGGAATTTTAATACGACTTTTTTTGACCCGGCTGGGGGTGGTGATCCGATTTTATATCAGCATCTTTTT
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Halisarca dujardinii",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:132736",
"confidence": 0.93
},
{
"method": "VSEARCH",
"scientificName": "Halisarca desqueyrouxae",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:932306",
"accession": "KY564211",
"identity": 0.981,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Halisarca dujardinii",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:132736",
"accession": "MG421851",
"identity": 0.978,
"query_cover": 0.9968
}
]
}
|
| organismQuantity |
2.0
|
|