identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Callopora lineata",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111197",
"confidence": 0.84
},
{
"method": "VSEARCH",
"scientificName": "Cryptosula_pallasiana",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111343",
"accession": "FJ196129.1.1578_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Cryptosula_pallasiana",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111343",
"accession": "JN680940.1.1832_U",
"identity": 0.995,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Bugula_turrita",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:159783",
"accession": "AY210443.1.1841_U",
"identity": 0.99,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Bugula_fulva",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111153",
"accession": "FJ152023.1.2123_U",
"identity": 0.99,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Callopora_dumerilii",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111196",
"accession": "FJ152025.1.2143_U",
"identity": 0.99,
"query_cover": 0.9952
}
]
}
|