| Occurrences: |
view occurrences
| id |
b672a9b4-0dca-4d9b-9cba-6d204ee0c1e1
|
| scientificName |
Polyclinum constellatum
|
| AphiaID |
215891
|
| eventDate |
2024-02-28
|
| decimalLongitude |
178.42325
|
| decimalLatitude |
-18.13513
|
| eventID |
SUVA2_20240228_S2A
|
| materialSampleID |
USP-24-01-212
|
| target_gene |
COI
|
| DNA_sequence |
CTTTCTTCTGTATTATCCCATTCCTCTCCGGCGGTGGATATAAGAATTTTTTCTTTACATCTCGCTAGGGTTTCTTCTATTCTTAGGTCTATAAATTTCTTAGTTACATTAAGGAATATAAAGCATAAGGGAATATCTTTTTCTTCTTATCCTTTATTTGTTTGGTCTATTATTGTAACTACAATCCTTCTTATTCTCTCTCTTCCTGTATTAGCTGCGGCAATTACAATACTTCTCTTTGATCGTAATCTTAATACTAGTTTTTTTGACCCAGCTGGAGGAAGAGATCCAATTCTTTTTCAGCATCTTTTT
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Polyclinum constellatum",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:215891",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Polyclinum constellatum",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:215891",
"accession": "OM912798",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Polyclinum constellatum",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:215891",
"accession": "MT873559",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Polyclinum constellatum",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:215891",
"accession": "OL597608",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Polyclinum constellatum",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:215891",
"accession": "OM912799",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Polyclinum constellatum",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:215891",
"accession": "OM912800",
"identity": 0.997,
"query_cover": 0.9968
}
]
}
|
| organismQuantity |
15.0
|
| id |
ee81fadd-948f-4f3c-8228-381575fdfc9b
|
| scientificName |
Polyclinum constellatum
|
| AphiaID |
215891
|
| eventDate |
2024-02-28
|
| decimalLongitude |
178.42325
|
| decimalLatitude |
-18.13513
|
| eventID |
SUVA2_20240228_S2B
|
| materialSampleID |
USP-24-01-213
|
| target_gene |
COI
|
| DNA_sequence |
CTTTCTTCTGTATTATCCCATTCCTCTCCGGCGGTGGATATAAGAATTTTTTCTTTACATCTCGCTAGGGTTTCTTCTATTCTTAGGTCTATAAATTTCTTAGTTACATTAAGGAATATAAAGCATAAGGGAATATCTTTTTCTTCTTATCCTTTATTTGTTTGGTCTATTATTGTAACTACAATCCTTCTTATTCTCTCTCTTCCTGTATTAGCTGCGGCAATTACAATACTTCTCTTTGATCGTAATCTTAATACTAGTTTTTTTGACCCAGCTGGAGGAAGAGATCCAATTCTTTTTCAGCATCTTTTT
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Polyclinum constellatum",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:215891",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Polyclinum constellatum",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:215891",
"accession": "OM912798",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Polyclinum constellatum",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:215891",
"accession": "MT873559",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Polyclinum constellatum",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:215891",
"accession": "OL597608",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Polyclinum constellatum",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:215891",
"accession": "OM912799",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Polyclinum constellatum",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:215891",
"accession": "OM912800",
"identity": 0.997,
"query_cover": 0.9968
}
]
}
|
| organismQuantity |
7.0
|
|