| Occurrences: |
view occurrences
| id |
f720581d-dcb1-4207-9684-391a6a96f22f
|
| scientificName |
Watersipora cucullata
|
| AphiaID |
111590
|
| eventDate |
2021-12-07
|
| decimalLongitude |
178.425933
|
| decimalLatitude |
-18.1293
|
| materialSampleID |
S122
|
| target_gene |
COI
|
| DNA_sequence |
TTTATCATCTAATATCTCCCATAGAGGATCATCTGTAGACATAGCAATTTTTGCTCTCCACTTAGCCGGTGTATCTTCAATTCTAGGAGCTATTAACTTTATAGTAACTATCATTAATATACGAGGTAGAAAAATGTCATTCATAAATCTACCTTTATTTGTATGAGCAGTATTTATTACCGCCTTACTACTTCTTCTATCTCTCCCAGTATTAGCCGGAGCTATTACTATATTACTAACAGACCGTAATTTCAACTCCTCATTCTTTGACCCAGCAGGTGGAGGAGATCCAATTCTATACCAACACTTATTT
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Watersipora subovoidea",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111591",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Watersipora subtorquata",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111592",
"accession": "MK359658",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Watersipora subovoidea",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111591",
"accession": "JQ715459",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Watersipora subtorquata",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111592",
"accession": "MK359661",
"identity": 0.987,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Watersipora subovoidea",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111591",
"accession": "JQ715458",
"identity": 0.986,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Watersipora subtorquata",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111592",
"accession": "MK359659",
"identity": 0.984,
"query_cover": 0.9968
}
]
}
|
| organismQuantity |
7.0
|
| id |
f30282ec-0e59-40db-8670-1710ebc3ef81
|
| scientificName |
Watersipora cucullata
|
| AphiaID |
111590
|
| eventDate |
2021-12-07
|
| decimalLongitude |
178.425933
|
| decimalLatitude |
-18.1293
|
| materialSampleID |
S118
|
| target_gene |
COI
|
| DNA_sequence |
TTTATCATCTAATATCTCCCATAGAGGATCATCTGTAGACATAGCAATTTTTGCTCTCCACTTAGCCGGTGTATCTTCAATTCTAGGAGCTATTAACTTTATAGTAACTATCATTAATATACGAGGTAGAAAAATGTCATTCATAAATCTACCTTTATTTGTATGAGCAGTATTTATTACCGCCTTACTACTTCTTCTATCTCTCCCAGTATTAGCCGGAGCTATTACTATATTACTAACAGACCGTAATTTCAACTCCTCATTCTTTGACCCAGCAGGTGGAGGAGATCCAATTCTATACCAACACTTATTT
|
| identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": null
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Watersipora subovoidea",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111591",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Watersipora subtorquata",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111592",
"accession": "MK359658",
"identity": 1,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Watersipora subovoidea",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111591",
"accession": "JQ715459",
"identity": 0.997,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Watersipora subtorquata",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111592",
"accession": "MK359661",
"identity": 0.987,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Watersipora subovoidea",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111591",
"accession": "JQ715458",
"identity": 0.986,
"query_cover": 0.9968
},
{
"method": "VSEARCH",
"scientificName": "Watersipora subtorquata",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:111592",
"accession": "MK359659",
"identity": 0.984,
"query_cover": 0.9968
}
]
}
|
| organismQuantity |
4.0
|
|