identificationRemarks |
{
"pipeline": "PacMAN pipeline",
"parameters": {
"rdp_confidence_threshold": 0.8,
"vsearch_identity_threshold": 0.97,
"vsearch_cover_threshold": 0.97,
"basta_identity_threshold": 99
},
"annotations": [
{
"method": "RDP classifier",
"scientificName": "Glycera capitata",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:130118",
"confidence": 1
},
{
"method": "VSEARCH",
"scientificName": "Glycera_lapidum",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:130123",
"accession": "GQ426560.1.1734_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Glycera_capitata",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:130118",
"accession": "GQ426558.1.1168_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Glycera_capitata",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:130118",
"accession": "GQ426557.1.1676_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Glycera_capitata",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:130118",
"accession": "GQ426556.1.1693_U",
"identity": 1,
"query_cover": 0.9952
},
{
"method": "VSEARCH",
"scientificName": "Glycera_onomichiensis",
"scientificNameID": "urn:lsid:marinespecies.org:taxname:328135",
"accession": "AY884163.1.1610_U",
"identity": 1,
"query_cover": 0.9952
}
]
}
|